Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0047 ATGGCAAGCCCAGGTCTGTACCGCAGAGCCCTGCCTTCTCCCCCTGCAGTCGACTTTGCTTCGCCGGAGGGCAAGAAGATTTTCGTGGAAGCTCTGGGGCAAGGAACCATGGAAGGCTTCTTCAAGTTGATATCAAACTATAAGACACAATCAGAACCTGCCTACTGTGCTCTCGCTACTCTCTCTGTTGTCCTCAATGCTCTTGCCATTGACCCTGGCAGAAAATGGAAAGGCCCTTGGAGATGGTTTGATGATTCCATGTTGGATTGCTGTGAACCTTTGGAGAAAATTAAAGCAGAAGGCCTAACGTTTGGAAAACTTGCATGCTTGGCTCGATGTAATGGAGCTAAAGTGGAAGCCTTTCGTGCCAATGGGAGTTCAGTCCATGATTTTCGTAACCGTGTGATTGCCTGTTGTTCTTCTGAGGATTGTCATGTGATTGTGTCTTACCACAGGGCACCACTCAATCAGACTGGAATTGGCCATTTTTCACCAATTGGAGGATATCATGCTGAAAGGGATATGGTCCTCGTGTTGGATGTGGCTCGTTTCAAATATCCTCCTCACTGGGTTCCCCTTAACCTTCTCTGGGATGCCGTAAGTACCATTGATCAAGCCACTGGTCTTTACAGGGGGTATATGATTATTTCAAAGCTTAACAGGGCACCATCTGTACTGTATACTGTGAGTTGCAGACACGAAGGTTGGAACAGTGTTGCCAAATTTCTAACTGAAGATGTTCAACAACTCCTAAAGTCAGAGGATCTAAAAGACATTCAGGAAGTACTCTCTGTTGTGTTTAAATCTCCTCCTGGTGAATTGAGAGAGTTAATCACATGGATTGCTGAAGTTCGCAGACAAGAAGATGGGACTCTCACACTGAGTGAGGATGAGAGAGGAAGGCTAGCTATCAAGGCAGATATACTGGAACAGATTCGGACAACTGCACTCTTCAAACATGTGACCAGGTGGTTGGATTCTGAAAGTACATGTTGTAATACTTTTGTGAAGCTCAGTGACAAAGAAATGTTACCAGCACTTGCTGCAGACGTTTGTTGCCAAGGGGCAGATCTTTTGACTGGTTGTGGTAGGCTAGCTTTGTCAAGTGGAAAATGCTGTTCTCAAATAGATGTAAAACAACTGAATGTTGATACAGAAAATCCAGTAACAATAGCTTCTGGAACTGTTGCAACTGGTGGTGGTAGTGTACAAGAAGTTGATGTGTTGGTCCCTTTGTGTCAAAGGGTGCCAAGTAGGTTTTGTCTTTCAAATGAAGGTCACTGCATTGGAATGCACCCGTCTACTGCAGATGTCTTAACGGTGCTTTTACTGGCCTTGCCATTGCATACATGGTCAGGCATTAAAGAAGAAAAACTGCAAGTGGAAGTTACAAGCCTTCTAATAACTGAAGATCTCCCTCCCTTACTTCAGGAAGAGGTTTCGTTCTTGCGAGAGCAACTCCATTTTCTCATGACTGACATTGGTGATCCTTCTCACTGA 1500 0.448 MASPGLYRRALPSPPAVDFASPEGKKIFVEALGQGTMEGFFKLISNYKTQSEPAYCALATLSVVLNALAIDPGRKWKGPWRWFDDSMLDCCEPLEKIKAEGLTFGKLACLARCNGAKVEAFRANGSSVHDFRNRVIACCSSEDCHVIVSYHRAPLNQTGIGHFSPIGGYHAERDMVLVLDVARFKYPPHWVPLNLLWDAVSTIDQATGLYRGYMIISKLNRAPSVLYTVSCRHEGWNSVAKFLTEDVQQLLKSEDLKDIQEVLSVVFKSPPGELRELITWIAEVRRQEDGTLTLSEDERGRLAIKADILEQIRTTALFKHVTRWLDSESTCCNTFVKLSDKEMLPALAADVCCQGADLLTGCGRLALSSGKCCSQIDVKQLNVDTENPVTIASGTVATGGGSVQEVDVLVPLCQRVPSRFCLSNEGHCIGMHPSTADVLTVLLLALPLHTWSGIKEEKLQVEVTSLLITEDLPPLLQEEVSFLREQLHFLMTDIGDPSH* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0047 499 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 5 493 IPR040409 GO:0016756|GO:0046872|GO:0046938
Apr4g0047 499 Pfam Domain of unknown function (DUF1984) 231 487 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Apr4g0047 499 Pfam Phytochelatin synthase 7 213 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Apr4g0047 499 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 221 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Apr4g0047 499 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 5 493 - -
Apr4g0047 499 Gene3D - 16 221 IPR038156 -
Apr4g0047 499 SUPERFAMILY Cysteine proteinases 13 217 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0047 Apr-Chr4 433393 438466 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0047 K05941 - gmx:100782042 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0047 4 433393 438466 Apr4g0047 4 433393 438466 ECH