Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0046 ATGGCGATGGCGGGGTTATATCGACGCCTTCTTTCTTGTCCCCCCGCTGTCGAATTCGCTTCTTCACAAGGCAAGCAACTTTTTCTAGAAGCCATTCAGAATGGAACAATGGAGGGGTTTTATAAGTTGGTTTCCTATTTTCAAACACAATCTGAGCCTGCTTTTTGTGGCCTCGCTAGCTTGTCTATGGTCCTCAATGCTCTTGCCATTGATCCTGGCAGGAAGTGGAAAGGTAACCCACCTTTAATATGTTCCCTATTTTCCCTACCCTTTTTTTTTTTTTTTTCAGGGCCTTGGAGATGGTTTGATGAATCTATGTTGGACTGTTGTGAACCTCTAGAAATGGTCAAAGTTAGGGGCATCTCTTTTGGGAAACTTGTATGTTTGGCTCATTGTGCTGGAGCAGAAGTTGAAGCCTTTCATGCTAGTCATAGCAGCATTGAGGATTTTCGTAGATATGTCATTGAGTGTTCAACTTCTGATGACTGTCATGTGATCTCGTCATACCATAGAGCTGCTCTCAAACAAACAGGAAATGGCCACTTTTCTCCTATTGGAGGCTATCATGTTGGGAAGGACATGGCACTTATTTTGGATGTTGCACGTTTTAAGTATCCTCCCCATTGGGTCCCCCTTACACTTCTTTGGGAAGGCATGAATTATGTTGATGAGTCTACTGGACAATCTAGGGGGTTCATGCTTATATCAAGGCCTCACAGGGAACCTGGCATGCTTTATACTCTGAGCTGCAAACATGAGAGCTGGATTAGTATTGCGAAATTCCTAATGGATGATGTTCCTCTTCTATTAAAATCAGAGGATGTGAAAGACATTCATCAGGTTCTTTCAATTATAGTCACATCACTTCCGTCTAATTTTGAAGAATTCATCAAGTGGGTTGCAGAGATCAGGAGGCGAGAGGATGGTGGTCCAAGTTTAAGTGCAGAGGAGAAAGCAAGGCTTGTTGTCAAGGAAGAGGTATTGAAACAGGTTCAAGAGAGAGGACTTTTCAAACATGTATCCTCCTTTTTGTCAAATTCTTGCAGCAGACAGACACCAACTTCAGGTGATGGAGACACGCTACCTGTCATTGCTGCAAGTGTTTGTTGCCAAGGAGCAGAAATTTTGGGTGGGAAACCAAGCTCATCATCAGGGTATTGCTGTCAAGAAACATGCATGAAATGCTGGAAAGCTGAAGATGACAAACCAATAACAATGGTTTCTGGGACTTACATTAGAATGCACCCAGCTAGCACTGATGTGCTGACAGTGCTTCTACTGTCCTTACCATCTACAACATGGGCTGGCATCACAAATGAGCGGCTTTTGACAGAAATACATAGTCTGGTTTCAATTGAAAACCTTCCAACTTTGCTTCAGGAAGAGGTTCTGCACTTGAGACGTCAGTTACACCTTCTCAAGAGATGTGAAGAGGGTAAGGTAGATGAGGATCTTGGTTCCCCTCTCTCTTAG 1473 0.4338 MAMAGLYRRLLSCPPAVEFASSQGKQLFLEAIQNGTMEGFYKLVSYFQTQSEPAFCGLASLSMVLNALAIDPGRKWKGNPPLICSLFSLPFFFFFSGPWRWFDESMLDCCEPLEMVKVRGISFGKLVCLAHCAGAEVEAFHASHSSIEDFRRYVIECSTSDDCHVISSYHRAALKQTGNGHFSPIGGYHVGKDMALILDVARFKYPPHWVPLTLLWEGMNYVDESTGQSRGFMLISRPHREPGMLYTLSCKHESWISIAKFLMDDVPLLLKSEDVKDIHQVLSIIVTSLPSNFEEFIKWVAEIRRREDGGPSLSAEEKARLVVKEEVLKQVQERGLFKHVSSFLSNSCSRQTPTSGDGDTLPVIAASVCCQGAEILGGKPSSSSGYCCQETCMKCWKAEDDKPITMVSGTYIRMHPASTDVLTVLLLSLPSTTWAGITNERLLTEIHSLVSIENLPTLLQEEVLHLRRQLHLLKRCEEGKVDEDLGSPLS* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0046 490 Gene3D - 16 239 IPR038156 -
Apr4g0046 490 SUPERFAMILY Cysteine proteinases 14 236 IPR038765 -
Apr4g0046 490 Pfam Domain of unknown function (DUF1984) 250 411 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Apr4g0046 490 Pfam Domain of unknown function (DUF1984) 411 470 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Apr4g0046 490 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 1 79 IPR040409 GO:0016756|GO:0046872|GO:0046938
Apr4g0046 490 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 95 488 IPR040409 GO:0016756|GO:0046872|GO:0046938
Apr4g0046 490 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 240 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Apr4g0046 490 Pfam Phytochelatin synthase 97 232 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Apr4g0046 490 Pfam Phytochelatin synthase 9 78 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Apr4g0046 490 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 2 1 79 - -
Apr4g0046 490 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 2 95 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0046 Apr-Chr4 428645 432278 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0046 K05941 - gmx:100808418 826.624