Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0043 ATGAACATCTTCAATAAGAAACCCACCGCCAAAGAGGCTCTTCGAGAGAGTAAACGAGAAATGGCCACCGCCACTAGAGGTATAGAGAGGGAAATTGGGGCATTACAATTGGAAGAAAAGAAGCTTCTTGCTGAGATAAAGAGAACTGCTAAGACGGGTAACGAGGGTGCAACTAAAACTCTAGCTCGCCAATTAGTGAGGCTTAGGCAACAGATTGCTAATCTTCAAGGTAGTCGAGCTCAGATGAGAGGCATCGCAACTCACACGCAGGCAATGCATGCTCATTCTTCTGTTGCTGTTGGCATGAAAGGTGCTACTAAGGCAATGGCAGCTATGAATAAGCAAATGGCGCCAGCAAAGCAAGCCAAAATTATACAGGACTTCCAGAAACAATCAGCGCAGATGGATATGACTACTGAAATGATGTCAGATGCCATAGATGATGCCTTGGATAATGATGAAGCTGAGGAGGAGACTGAAGAGCTGACAAATCAGGTGCTCGATGAAATTGGTGTAGATATTGCCTCACAGTTATCAGCAGCTCCCAAAGGAAGAGTCGGAACAAAGAATACTGAAGATGTCAGCAGCTCGGGCATTGATGATCTCGAGAAACGTTTGGCAGCTCTTAGAGACCCATAA 639 0.4538 MNIFNKKPTAKEALRESKREMATATRGIEREIGALQLEEKKLLAEIKRTAKTGNEGATKTLARQLVRLRQQIANLQGSRAQMRGIATHTQAMHAHSSVAVGMKGATKAMAAMNKQMAPAKQAKIIQDFQKQSAQMDMTTEMMSDAIDDALDNDEAEEETEELTNQVLDEIGVDIASQLSAAPKGRVGTKNTEDVSSSGIDDLEKRLAALRDP* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0043 212 MobiDBLite consensus disorder prediction 177 212 - -
Apr4g0043 212 Gene3D - 4 181 - -
Apr4g0043 212 Coils Coil 58 78 - -
Apr4g0043 212 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 3 2 211 - -
Apr4g0043 212 MobiDBLite consensus disorder prediction 1 22 - -
Apr4g0043 212 MobiDBLite consensus disorder prediction 196 212 - -
Apr4g0043 212 Pfam Snf7 16 185 IPR005024 GO:0007034
Apr4g0043 212 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 2 211 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0043 Apr-Chr4 416078 419295 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0043 K12192 - gmx:100499888 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0043 4 416078 419295 Apr4g0043 4 416078 419295 ECH