Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0035 ATGGGTTCTCTGCCTGCATTTCCACCCTCGCCATCCAAACAAGGCGTTAGCGAGAGCCACATTGACGAAAGCACCCTCTCAGGCCTATTCAAATCGCAGCAGAGTCATCTCAACTTCTTCTTCGAACACATCGACCACTCCCAAACCCTAGCATTCACGCGCGCCCTCCTCCACACCGCCGGCACCGTATTCTTCACCGGCGTCGGCAAATCCGGCTTCGTCGCCAATAAGATCTCCCAAACACTCGTCTCTCTGGGCATCCGCTCCGCCTTCCTCTCTCCGGTCGACGCTCTCCACGGCGACATCGGAATTCTCTCCTATCGCGACGTCCTCGTCCTCCTCAGCAAGTCCGGCGCCACCGACGAGCTCCTCCGTCTCGTGCCCTGTGCCAAGGCCAAGGGCGCACACCTCATCGCCCTCACCTCCGTCGAAGGCAACGCGTTGTCGGCGATGTGCGACATGACCGTGCATTTGCCTCTCCAGAGAGAACTCTGTCCCTTCAACCTCGCTCCGGTGACTTCCACCGCCATCCAGATGGTGTTCGGCGACACCGTGGCCATCGCACTCATGGAAGCGAAGAATCTCACCAAGGAAGAATACGCCGCCAACCATCCCGCTGGCAAGATTGGGAAGAGTCTCATCTTCAAGGTGAAGGACTTGATGAAGAAACAGGTGGAGGTTCCGATTTGCAGGGAATCGGATTTGATTATGGATCAACTCGTAGAGTTAACTAGTAAAGGGTGTGGATGCCTTCTTGTGATAGATGAAGGTTACCATCTGATTGGAACGTTCACGGACGGCGATCTGCGTCGCACTCTTAGGTCAAGTGGAGAAGCCATTTTCAAACTCACTGTAGGGAAAATGTGCAACAGGAATCCGAGAACTATTGGTCCAGAGGCTATGGCAGTGGAGGCAATGAAGAAGATGGAAGCGCCTCCATCGCCAGTGCAGTTTTTGCCTGTCATAAATGATGACAATATCGTGATTGGGATTGTGACGTTGCATGGTTTGGTTTCGGCTGGGTTGTGA 1029 0.5432 MGSLPAFPPSPSKQGVSESHIDESTLSGLFKSQQSHLNFFFEHIDHSQTLAFTRALLHTAGTVFFTGVGKSGFVANKISQTLVSLGIRSAFLSPVDALHGDIGILSYRDVLVLLSKSGATDELLRLVPCAKAKGAHLIALTSVEGNALSAMCDMTVHLPLQRELCPFNLAPVTSTAIQMVFGDTVAIALMEAKNLTKEEYAANHPAGKIGKSLIFKVKDLMKKQVEVPICRESDLIMDQLVELTSKGCGCLLVIDEGYHLIGTFTDGDLRRTLRSSGEAIFKLTVGKMCNRNPRTIGPEAMAVEAMKKMEAPPSPVQFLPVINDDNIVIGIVTLHGLVSAGL* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0035 342 Pfam CBS domain 217 273 IPR000644 -
Apr4g0035 342 Pfam CBS domain 285 340 IPR000644 -
Apr4g0035 342 ProSiteProfiles CBS domain profile. 289 342 IPR000644 -
Apr4g0035 342 ProSiteProfiles CBS domain profile. 221 280 IPR000644 -
Apr4g0035 342 Pfam SIS domain 57 187 IPR001347 GO:0097367|GO:1901135
Apr4g0035 342 ProSiteProfiles SIS domain profile. 53 195 IPR001347 GO:0097367|GO:1901135
Apr4g0035 342 Gene3D - 23 211 - -
Apr4g0035 342 PANTHER - 1 342 - -
Apr4g0035 342 CDD CBS_pair_SIS_assoc 213 338 - -
Apr4g0035 342 Gene3D - 212 340 IPR046342 -
Apr4g0035 342 TIGRFAM kpsF: sugar isomerase, KpsF/GutQ family 61 332 IPR004800 GO:0005975|GO:0016853
Apr4g0035 342 SUPERFAMILY SIS domain 46 341 IPR046348 GO:0097367|GO:1901135
Apr4g0035 342 PIRSF KdsD_KpsF 11 342 IPR004800 GO:0005975|GO:0016853
Apr4g0035 342 CDD SIS_Kpsf 61 188 IPR035474 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0035 K06041 - gmx:100805755 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0035 4 336283 337962 Apr4g0035 4 336283 337962 ECH