Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0010 ATGGATTCATCTAACGACGTCGCTTTGTGCTCGCCGGAGATGGAGAAGTTCCTGTGTGAGTTGTTGCTGGATTCCACCCAGCCAATTTCTGAGCGCTTCAGAGCACTCTTCTCTCTCCGCAACCTCAAAGGTCCCGCCCCTCGCAGCGCCCTCATTCTCGCCACCAGGGATTCATCGAATTTGTTGGCGCATGAAGCTGCATTTGCGTTGGGTCAAATGCAAGAATTGGAAGCCATCCCTGCTCTGGCCTCAGTTTTGAATGATCTTTCTTTGCATCCAATTGTTCGGCATGAGGCAGCTGAAGCACTTGGTGCTATTGGTTCAGATGGTAATGTCTCTCTCTTGAAGAATAGTATGGATTCAGATCCGGCCCAGGAGGTTCGAGAAACGTGTGAATTGGCTCTTCAACGTATTCAGCATTTAAAAGATGCTGGTAATGCTGCTGATGAAATGTCTGCAACTGATATATCTCCTTTCAAGTCTGTTGATCCAGCTGCGCCTGCAACCTCTGGTTCTTCTGTTGATCAATTAAGGCAATTACTTCTTGATGAAGAAAGAGGGATGTATGAGCGCTATGCAGCTCTTTTTGCACTTCGAAATGATGGTGGAAATGAAGCTGTTGCTGCTATCATTGGTTCCTTGGGCTCAAAAAGTGCTTTACTGCGCCATGAGGTTGCATATGTTTTGGGTCAATTGCAAGACAAAGCTGCTTCAGCTGCTCTATCCAATATACTTAGAGATGTGAATGAGCATCCAATGGTTAGACATGAGGCGGCTGAAGCTCTTGGTTCGATTGCAGATGACCAAAGTGTAGCCCTTCTGGAGGAGTTTACAGCAGATCCAGAACCTCTCGTCTCACAAAGTTGTCAAGTTGCATTAAGCATGCTAGAATTTGAACAATCAGGGAAATCATTTGAGTTCCTGTTCATGCGCACTCCAACTGTGCATTAA 951 0.4616 MDSSNDVALCSPEMEKFLCELLLDSTQPISERFRALFSLRNLKGPAPRSALILATRDSSNLLAHEAAFALGQMQELEAIPALASVLNDLSLHPIVRHEAAEALGAIGSDGNVSLLKNSMDSDPAQEVRETCELALQRIQHLKDAGNAADEMSATDISPFKSVDPAAPATSGSSVDQLRQLLLDEERGMYERYAALFALRNDGGNEAVAAIIGSLGSKSALLRHEVAYVLGQLQDKAASAALSNILRDVNEHPMVRHEAAEALGSIADDQSVALLEEFTADPEPLVSQSCQVALSMLEFEQSGKSFEFLFMRTPTVH* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0010 316 Gene3D - 164 308 IPR011989 -
Apr4g0010 316 Pfam PBS lyase HEAT-like repeat 254 277 IPR004155 -
Apr4g0010 316 Pfam PBS lyase HEAT-like repeat 221 247 IPR004155 -
Apr4g0010 316 SUPERFAMILY ARM repeat 61 295 IPR016024 -
Apr4g0010 316 Coils Coil 124 144 - -
Apr4g0010 316 SMART E-Z type HEAT repeats 60 89 IPR004155 -
Apr4g0010 316 SMART E-Z type HEAT repeats 252 281 IPR004155 -
Apr4g0010 316 SMART E-Z type HEAT repeats 93 122 IPR004155 -
Apr4g0010 316 SMART E-Z type HEAT repeats 188 217 IPR004155 -
Apr4g0010 316 SMART E-Z type HEAT repeats 29 58 IPR004155 -
Apr4g0010 316 SMART E-Z type HEAT repeats 219 248 IPR004155 -
Apr4g0010 316 Pfam HEAT repeats 53 135 - -
Apr4g0010 316 Hamap Deoxyhypusine hydroxylase [DOHH]. 15 306 IPR027517 GO:0008612|GO:0019135
Apr4g0010 316 PANTHER PBS LYASE HEAT-LIKE PROTEIN 20 300 - -
Apr4g0010 316 PANTHER DEOXYHYPUSINE HYDROXYLASE 20 300 - -
Apr4g0010 316 Gene3D - 7 158 IPR011989 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0010 K06072 - gmx:100815364 531.561