Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0006 ATGAATTTGGAATCGGAGTCCGGTGGCGGTGTGGGTGGCGGTGTGGGAGGGAACGGAACGCTGATCCTGCCAGGTCTCCCAAACGACGTCGCAGCATTGATCCTCTCAAAGGTACCATATTCCCACCACGGAAGGCTCAAAGGAACATGCAAATCATGGAAAGTGCTTCTCTCCTCGAAGTCCTTTCTAACATCTCTAAAACGCAACAATCACCTTCTCTGCATATTCCCACAAGACCCTTCAATCGCTTCCCCTTTTCTATTCGATCCAAACGCACTCGCATGGTGCCCTCTCCCTCCCATGCCTTGTAACCCTTCCGTTTATGGTCTCTGTAACTTCGCTGCTGTTTCTTTCGGCCCTCATATATACGTTCTCGGTGGTTCCCTCTTCGACACGCGCTCCTTCCCCATCGATCGTCCCTCTCCCACGTCCTCCACTTTTCGCTTCAACTTCCATGATTTTTCGTGGGAGTCACGCGCTCCTATGCTCTCCCCGCGTGGAAGCTTCGCATGTGCTGCTGTTCCTCACAGAGGGCATATTCTGGTGGCCGGTGGGGGGTCGCGACACACCATGTTTGGTGCTGCTGGGACCAGGATTCGGTCGGTGGAGCGGTACGATGTTGGGAGGGACCGTTGGGTGGCTTTGGATCCTCTTCCGGGGTTTCGTGCGGGCTGTGTGGGGTTCGTGGGTGAGGAGGGGAGGGAGTTTTGGGTGATGGGAGGGTACGGCGCCTCCAGAACTATTTCCGGGGTGTTTCCGGTGGATGAATATTATAGGGATGCGGTGGTGATGGGAGTAGAGGGTGGCCCGTGGCGTGAGGTTGGGGATATGTGGGGGGATGGAGAGATGGTTAGGGTTGGGAAGATTGTTGTGGCTGAGGACCGTGGCTGTCCCGCGGTTTTCATGCTCGATGGGAATGAGATTTTGAGATATGACATGTCTTCGAATCGTTGGGTATACGAGTCTCGCGTGCCAAGAAAAGCCCCTTACAATTCGTCATTTGGTTTTGTAGTAGTAGACGCGGAGCTGTATGTAGTGACACATTCATGTGGTGTTGATTTTACAGAAACGCGAAGGTCCAGACAGAATAAGAGGGCTGGAACTCTGTACATTCAAATATATAGCCCAAAAAAGAAGTCATGGAGATCCCTAGTCACAAAATCACCTTTCAATTACTCTATAGATATTAATAGTGCTGTATTGAGCCCAATTTGTCTATGA 1221 0.5184 MNLESESGGGVGGGVGGNGTLILPGLPNDVAALILSKVPYSHHGRLKGTCKSWKVLLSSKSFLTSLKRNNHLLCIFPQDPSIASPFLFDPNALAWCPLPPMPCNPSVYGLCNFAAVSFGPHIYVLGGSLFDTRSFPIDRPSPTSSTFRFNFHDFSWESRAPMLSPRGSFACAAVPHRGHILVAGGGSRHTMFGAAGTRIRSVERYDVGRDRWVALDPLPGFRAGCVGFVGEEGREFWVMGGYGASRTISGVFPVDEYYRDAVVMGVEGGPWREVGDMWGDGEMVRVGKIVVAEDRGCPAVFMLDGNEILRYDMSSNRWVYESRVPRKAPYNSSFGFVVVDAELYVVTHSCGVDFTETRRSRQNKRAGTLYIQIYSPKKKSWRSLVTKSPFNYSIDINSAVLSPICL* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0006 406 PANTHER F-BOX/KELCH-REPEAT PROTEIN OR23 20 406 - -
Apr4g0006 406 Pfam Kelch motif 110 162 IPR006652 GO:0005515
Apr4g0006 406 Pfam Kelch motif 171 218 IPR006652 GO:0005515
Apr4g0006 406 Gene3D - 78 396 IPR015915 GO:0005515
Apr4g0006 406 SUPERFAMILY Kelch motif 77 384 IPR015915 GO:0005515
Apr4g0006 406 Pfam F-box domain 25 62 IPR001810 GO:0005515
Apr4g0006 406 SMART kelc_smart 179 232 IPR006652 GO:0005515
Apr4g0006 406 SMART kelc_smart 121 176 IPR006652 GO:0005515
Apr4g0006 406 SUPERFAMILY F-box domain 23 75 IPR036047 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0006 - - gmx:100820159 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0006 4 89096 95841 Apr4g0006 4 89096 95841 ECH