Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1977 ATGGCTTCAACTGCTCCTGAGTTTATCCAACAATGCAACAACAAAACAAGTTTCATAAGCGTTAAAGCGCTAACTGAATCACCTGAACTCAACTCCATCCCACCATCATACACCTTCACCACCAATCCACGTGATGAAATAGAAGCAGATCCAGATGATGATGATCCAATCCCTATCATTGATTATTCTCTCTTGGTCAATGGTACACCTCATCAACGGTCCAAAACCATCCATGACTTAGGCAAGGCTTGTGAGCAGTGGGGATTTTTCATGCTCATCAATCACTCGGTGTCAAAAATCCTCATGGAGAAAATGGTTGATGAAGTATTTGCATTTTTCAATCTCAAAGAAGAGGAGAAGCAAGGGTATGCAAGTAAGGATTTTATGGACCCAATAAGGTATGGCACCAGCTTCAATGCTTCAATGGACAAAGTTTTATTCTGGAGGGATTTCCTTAAAATTGTTGTGCACCCAGAATTTCACTCACCTGACAAACCAGTTGGGTTCAGGGATACATCTTCGGAGTACTGTAGAAGAACCTGGAAAGTGGGAAGGGAACTACTCAAAGGAATATCAGAAAGCTTGGGATTGGAATCCAATTATATTGACAGAACAATGGACCTAGATTCTGGTTGGCAAATGATAGCTGCGAATCTTTATCCACCTTGTCCGCAACCTGAGCTTGCTATGGGAATGCCCCCACATTCTGATCATGGCCTATTGACCCTTCTCATGCAGAATGGGGTTAGTGGCCTTCAAGTGCTTCATAGTGGCAAGTGGATCAATGTCAATTCAACTCCAAACTGCTTATTAGGCCTTGTGTCTGATCACCTTGAGGTTATGAGCAATGGAAAGTACAAGAGTGTGTTACATAGAGCAGTTGTGAGCAACAAAGCTACAAGAATGTCCTTGGCAATAGTAACTGCACCATCGTTGGATACTGCGGTGGAACCAGCTAAAGAGCTGCTAGACAATCAAAGTAATCCAGCAGCATACGTTGGGATGAAACAAAGAGATTATATGCAACTTCAGCGAAGCAACCATCTTTATGGGAAGTCTGTGCTAGACAAACTTAAAATCTGA 1083 0.4247 MASTAPEFIQQCNNKTSFISVKALTESPELNSIPPSYTFTTNPRDEIEADPDDDDPIPIIDYSLLVNGTPHQRSKTIHDLGKACEQWGFFMLINHSVSKILMEKMVDEVFAFFNLKEEEKQGYASKDFMDPIRYGTSFNASMDKVLFWRDFLKIVVHPEFHSPDKPVGFRDTSSEYCRRTWKVGRELLKGISESLGLESNYIDRTMDLDSGWQMIAANLYPPCPQPELAMGMPPHSDHGLLTLLMQNGVSGLQVLHSGKWINVNSTPNCLLGLVSDHLEVMSNGKYKSVLHRAVVSNKATRMSLAIVTAPSLDTAVEPAKELLDNQSNPAAYVGMKQRDYMQLQRSNHLYGKSVLDKLKI* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1977 360 PANTHER FLAVONOL SYNTHASE/FLAVANONE 3-HYDROXYLASE 15 360 - -
Apr3g1977 360 Pfam 2OG-Fe(II) oxygenase superfamily 213 306 IPR044861 -
Apr3g1977 360 Gene3D - 16 348 IPR027443 -
Apr3g1977 360 Pfam non-haem dioxygenase in morphine synthesis N-terminal 57 162 IPR026992 -
Apr3g1977 360 SUPERFAMILY Clavaminate synthase-like 24 349 - -
Apr3g1977 360 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 211 310 IPR005123 -
Apr3g1977 360 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 15 360 - -
Apr3g1977 360 MobiDBLite consensus disorder prediction 32 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1977 Apr-Chr3 35813488 35815183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1977 57 360 Glycosyltransferase AT5G59530 34.405 2.25e-49 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1977 - - gmx:100818482 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1977 3 35813488 35815183 Apr3g1977 3 35813488 35815183 ECH