Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1928 ATGAAGCTTTTGTCACTGGACAGAGACAACACAATCTCTCTCTCTCACTCTCTGAAGTCTGAACACAGCACTATCTTCTTCCCATCTTCAGAGTTCCCTGATGTGAAGGCATTCCGGAATGCAATTAAAGAAGCTGCTATTGCACAGCATTTTGAGCTTCGGACTATTAAAAGTGACTTGATTCGCTACTTTGCTAAGTGTGCCTCAGATGGCTGTCCATGGCGGATTCGTGCTGTCAAACTCCCTAATGCTCCAACCTTTACAATTAGAAGTATTGATGGGACGCATACATGTGGGAGAAATGCACACAATGGGCACCAGCAGGCATCTGTTGATTGGATTGTGAGTTTCATAGAAGAAAGGTTGCGAGATAACATCAATTATAAACCAAAAGATATATTACATGACATCCATAAACAATATGGTATAACCATACCATACAAGCAAGCTTGGCGTGCAAAGGAGCGAGGCCTCGCAGCGATATATGGCTCTTCTGAAGAAGGATATTACCTACTTCCTTCGTACTGTGAACAAATAAGGAAAACAAATCCTGGAAGTGTTGCAGAGGTATTTACCAATGGTGCAGATAACCGTTTTCAGAGACTTTTTGTTTCCTTCTATGCATCAATTTATGGTTTTGTTAATGGTTGTTTGCCAATTATTGGACTTGGAGGAATCCAGCTGAAAAGTAAATACCTTAGCACATTGCTTTCAGCAACTTCATTTGATGGTGATGGTGGGTTGTTTCCACTTGCTTTAGGTGTTGTTGATGTAGAAAATGATGAAAGCTGGAAATGGTTCCTGTCTGAGTTGCAGAAGGTATTGGAGGCAAATACTGAATGCTTGCCAGAGATAATATTTTTGTCAGATGGGCAACAGGGTATTACGGATGCAGTAAGAAGGAAGTTCCCAGGTTCTTCTCATGCATTTTGCATGCGTTATTTAACTGAAAGCATTGGCAAAGAGTTCAAGAATTCTAGGCTTGTCCATCTTTTGTGGAAGGCTGCATATGCCACCACAACCATTGCATTTAAAGAAAAAATGGCTGAAATAGAGGAGGTCTCTCCTGAAGCTGCTAAATGGTTGCAACAATTTCATCCTTCTCAATGGGCCCTAGTATATTTTAAAGGGACACGATTTGGCCATCTATCCTCTAATATTGAGGAGTTCACTAAATGGATTCTTGAAGCTCGGGAGCTACCAATTATCCAGGTGATTGAGCAGATTCATGGCAAACTTAAAACTGAGTTTGATGACAGGCGTTTAAAAAGCAGCTCTTGGTGCTCTGTGCTTTCCCCATCTGCGGAGAGGCAAATGGCTGAAGCCATTAACCATGCATCTACTTATCAAGTCCTTAGATCAGATGAAGTAGAGTTTGAGGTTCTTTCAGCTGATCGATCAGATATTGTAAATATTGGCAGCCATAGCTGTTCCTGCCGTGATTGGCAGCTAAACGGGATTCCATGTTCCCATGCTGTTGCTGCTCTCATCTCATGCCGTAAGGATGTGTACGGATTTGCAGAGAAGTGTTTTACTGCTGCAAGTTATAGGGATACCTATGCTGAGGGTATACATCCCATCCCAGGAAAACTTGAATGGAGAAAAACAGACAAGTCTACCACGGATGATAATATCATAGTTGTACGGCCACCAAAATTACGGCGACCACCTGGACGCCCCGAAAAACGGGTGTGTATGGAGGAACTTAATCGTGAGAAACACACAGTGCATTGTAGTCGATGTAATCAAACTGGACATTACAAGAGAACTTGCAAAGCAGAGACAATTAATAGAATAGAACAGTTTTAG 1809 0.419 MKLLSLDRDNTISLSHSLKSEHSTIFFPSSEFPDVKAFRNAIKEAAIAQHFELRTIKSDLIRYFAKCASDGCPWRIRAVKLPNAPTFTIRSIDGTHTCGRNAHNGHQQASVDWIVSFIEERLRDNINYKPKDILHDIHKQYGITIPYKQAWRAKERGLAAIYGSSEEGYYLLPSYCEQIRKTNPGSVAEVFTNGADNRFQRLFVSFYASIYGFVNGCLPIIGLGGIQLKSKYLSTLLSATSFDGDGGLFPLALGVVDVENDESWKWFLSELQKVLEANTECLPEIIFLSDGQQGITDAVRRKFPGSSHAFCMRYLTESIGKEFKNSRLVHLLWKAAYATTTIAFKEKMAEIEEVSPEAAKWLQQFHPSQWALVYFKGTRFGHLSSNIEEFTKWILEARELPIIQVIEQIHGKLKTEFDDRRLKSSSWCSVLSPSAERQMAEAINHASTYQVLRSDEVEFEVLSADRSDIVNIGSHSCSCRDWQLNGIPCSHAVAALISCRKDVYGFAEKCFTAASYRDTYAEGIHPIPGKLEWRKTDKSTTDDNIIVVRPPKLRRPPGRPEKRVCMEELNREKHTVHCSRCNQTGHYKRTCKAETINRIEQF* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1928 602 PANTHER POLYPROTEIN, PUTATIVE-RELATED 26 593 - -
Apr3g1928 602 PANTHER OS01G0334000 PROTEIN 26 593 - -
Apr3g1928 602 Pfam SWIM zinc finger 466 499 IPR007527 GO:0008270
Apr3g1928 602 Pfam MULE transposase domain 229 315 IPR018289 -
Apr3g1928 602 ProSiteProfiles Zinc finger CCHC-type profile. 578 592 IPR001878 GO:0003676|GO:0008270
Apr3g1928 602 ProSiteProfiles Zinc finger SWIM-type profile. 459 500 IPR007527 GO:0008270
Apr3g1928 602 SMART 26again6 475 502 IPR006564 GO:0008270
Apr3g1928 602 Pfam MuDR family transposase 31 89 IPR004332 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1928 Apr-Chr3 35290081 35294698 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1928 - - aprc:113859928 1220.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1928 3 35290081 35294698 Apr3g1928 3 35290081 35294698 ECH