Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1690 ATGGGAGAGGTAAACCCAGCTTTCATCCAAGACCCACAACACAGGCCAAAGCTCTCTACCATCCAAGCCGAAGGAATTCCCGTAATAGACCTCTCTCCGATAACCCATCACACAGTTTCTGATCCATCAGCTATTGAAGCTTTGGTGAAGGAGATTGGAAGTGCATGCAAGGAATGGGGTTTCTTCCAAGTAATAAATCATGGGGTGCCTTTAATTCTTAGGCAGAAGATGGAGGAAGCATCAAGGTTGTTCTTTGCACAGAGTTTGGAGGAGAAGAAGAAGGTTAGCAGAGGTGAAAGCTATACCTTGGGTTATTATGACACCGAACATACCAAAAACGTTAGAGACTGGAAAGAAGTGTTTGATTATCTAGCCCAAGTACCCACTTCCCTTCCTGTCACCCCAGATGAACACGACGATCGAGTCACTCGGTGGACTAATCCTTCACCTCAATACCCTCCAAACTTCAGGGTTATATTGCAAGAGTATATTCAAAAGATGGAAAAGTTGTCCTATAAGTTGTTGGAGCTTATAGCTATGAGTTTAGGCCTTGAGGCAAAGAGTTTTGAAGAATATTTCATCAAAGATCAAACTAGCTTTATTCGACTCAACCACTATCCTCCATGCCCTTACCCTGACCTTGCTCTTGGTGTTGGTCGACACAAGGATCCTGGTGCCTTAACCATTCTTGCACAAGATGAGGTTGGAGGACTTGAAGTGAAGCACAAAGCAGATCAAGAGTGGGTAAAAGTGAAACCCACCCCAGATGCTTATATAATCAATGTTGGTGATATTATTCAGGTTTGGAGCAATGATGCCTATGAGAGTGTAGAACATAGAGTGTTGGTCAACTCTGAGAAAGAAAGGTTTTCCATTCCATTCTTCTTCTTCCCTGCACAAGACACTGAAGTTAGGCCTTTGGAGGAGCTGATAAATGAGCAAAACCCTTCAAAATATAGGCCATACCAATGGGGAAAGTTTTTTGTCCACAGAGTGAGCAGCAATTTCAAGAAACAAAATGTTGGGAACATTCAGATATATCATTATAAGATAGCTTAA 1059 0.424 MGEVNPAFIQDPQHRPKLSTIQAEGIPVIDLSPITHHTVSDPSAIEALVKEIGSACKEWGFFQVINHGVPLILRQKMEEASRLFFAQSLEEKKKVSRGESYTLGYYDTEHTKNVRDWKEVFDYLAQVPTSLPVTPDEHDDRVTRWTNPSPQYPPNFRVILQEYIQKMEKLSYKLLELIAMSLGLEAKSFEEYFIKDQTSFIRLNHYPPCPYPDLALGVGRHKDPGALTILAQDEVGGLEVKHKADQEWVKVKPTPDAYIINVGDIIQVWSNDAYESVEHRVLVNSEKERFSIPFFFFPAQDTEVRPLEELINEQNPSKYRPYQWGKFFVHRVSSNFKKQNVGNIQIYHYKIA* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1690 352 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE, NON-HEME DIOXYGENASE DOMAIN-CONTAINING PROTEIN-RELATED 2 343 - -
Apr3g1690 352 SUPERFAMILY Clavaminate synthase-like 3 337 - -
Apr3g1690 352 Pfam 2OG-Fe(II) oxygenase superfamily 199 298 IPR044861 -
Apr3g1690 352 Pfam non-haem dioxygenase in morphine synthesis N-terminal 26 137 IPR026992 -
Apr3g1690 352 Gene3D - 1 339 IPR027443 -
Apr3g1690 352 PRINTS Isopenicillin N synthase signature 52 69 - -
Apr3g1690 352 PRINTS Isopenicillin N synthase signature 221 242 - -
Apr3g1690 352 PRINTS Isopenicillin N synthase signature 286 304 - -
Apr3g1690 352 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 197 298 IPR005123 -
Apr3g1690 352 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 2 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1690 Apr-Chr3 32543608 32545074 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1690 26 351 Glycosyltransferase AT5G59530 34.132 6.41e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1690 - - gmx:100101864 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1690 3 32543608 32545074 Apr3g1690 3 32543608 32545074 ECH