Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1689 ATGGGAGAGGTAGACCCTGTTTTTCTTCAGGCACCAGAACACAGGCCAAAATCCTCAGTGATAGAAGCTGAAGGTATCCCTCTGATTGATCTTTCTCCCATAAACTACCAAGAAGAACACACCATCCCAGAAACAGTTTCCTCCATCCAAGGCTTGGTTAAAGAAATAGGAAGTGCATGTAAGGAGTGGGGTTTTTTTCAGGTAATAAATCACAAGGTTCCTTTGGATAAGCGTGAGAGGATTGAAGAAGTTGCAAAAAAGTTCTTTGCACTTAGTTTGGAGGAAAAGCTGAAGGTGAGAAGGGATGCTGTTAACGTACTAGGTTACTTTGAAGCAGAGCATACCAAGAATGTAAGGGACTGGAAAGAGATTTACGATTTCAATGTGCAGGAACCTACTTTTATTCCACCTTTAGCTGAACCAGTTGATGAGCAAAACGTTCAGTTCCAATGGGATAATCGCTGGCCTGAAAATCCTCCTGAATTCAGAGAAGCATGCCAAGAATATGCAGAAGAAGTGGAGAAACTGGCTTATAAGTTGATGGAACTTGTGGCACTTAGCTTAGGCTTAGAACGAGATAGGTTCCGTGGCTTCTTCAGACATAACACCAGCAATATCAGACTCAACCATTATCCACCTTGCCCCTACCCTCATCTGGCTCTTGGTCTTGGACATCACAAGGACACTGGTGTCTTGACTGTGCTTGCTCAAGATGATGTTGGTGGACTTGAAGTTAAGAGAAAATCAGATGGAGAGTGGATTCGAATCAAGCCCATTTTCAATTCCTTCATAATTAATGTTGGTGATATGATTCAGGTTTGGAGCAATGACGCCTATGAGAGTGTAGAGCACAGGGTTATGGTGAACTCTGAGAGGGATAGGTTCTCCATTCCGTTCTTTCTGAAACCAGCACTCTACACTGATGTGAAGCCCTTGGAAGAGTTGACTCACGATACAAACCCTCCCAAATATACATCAATCAACTGGGGCATGTTTCGCACCACCAGAATGAGGAGTAATTTTGTTAAATCCAATGTTCAAAACCTCCAAATTTATCACTTCAAACTTTCCCAGTAG 1077 0.4271 MGEVDPVFLQAPEHRPKSSVIEAEGIPLIDLSPINYQEEHTIPETVSSIQGLVKEIGSACKEWGFFQVINHKVPLDKRERIEEVAKKFFALSLEEKLKVRRDAVNVLGYFEAEHTKNVRDWKEIYDFNVQEPTFIPPLAEPVDEQNVQFQWDNRWPENPPEFREACQEYAEEVEKLAYKLMELVALSLGLERDRFRGFFRHNTSNIRLNHYPPCPYPHLALGLGHHKDTGVLTVLAQDDVGGLEVKRKSDGEWIRIKPIFNSFIINVGDMIQVWSNDAYESVEHRVMVNSERDRFSIPFFLKPALYTDVKPLEELTHDTNPPKYTSINWGMFRTTRMRSNFVKSNVQNLQIYHFKLSQ* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1689 358 PRINTS Isopenicillin N synthase signature 56 73 - -
Apr3g1689 358 PRINTS Isopenicillin N synthase signature 226 247 - -
Apr3g1689 358 PRINTS Isopenicillin N synthase signature 291 309 - -
Apr3g1689 358 PANTHER GIBBERELLIN-44 DIOXYGENASE-RELATED 2 349 - -
Apr3g1689 358 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 202 303 IPR005123 -
Apr3g1689 358 Gene3D - 1 343 IPR027443 -
Apr3g1689 358 Pfam 2OG-Fe(II) oxygenase superfamily 204 303 IPR044861 -
Apr3g1689 358 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 2 349 - -
Apr3g1689 358 Pfam non-haem dioxygenase in morphine synthesis N-terminal 26 158 IPR026992 -
Apr3g1689 358 SUPERFAMILY Clavaminate synthase-like 3 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1689 Apr-Chr3 32539474 32541716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1689 17 324 Glycosyltransferase AT5G59530 32.692 1.44e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1689 - - var:108334761 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1689 3 32539474 32541716 Apr3g1689 3 32539474 32541716 ECH