Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1662 ATGGGCACTTCTCAGAGCCGCGAGGGCCTCGAAGTCACCGACTCTGACTCCGATCACGAAGAACAACGCGAAGAAGAAGAAGAAGAAGAAGAACAGGACGAAGACGCCCAAACACCCTCCGTTTCCCAATCGACCAAGCTCGACGACGTCGACGCCAAACTCAAAGCCCTCAAACTCAAATATCAATCACCTTCTTCCTCCACCAAACCCCAAAACGTCGTCAAGCTTTACCTCCACATTGGCGGTAACACTCCCAACGCTAAATGGATCCTCTCCGACAAACACACTTCCTACACCTTCCTCAAATCAAACGACAACGAAGAAGACGAAAACGACGATGGTGAGGGTAATTGGGCTCTCAAGGTCGGTTCCAAGGTTCGCTCTAGGGTTTCTTCTGAAATGCAATTGAAGATGTTCGGCGATCAACGCCGCGTCGATTTCGTCGCCAACGGCGTCTGGGCCCTCAAATTTCCCTCCGACGACACTTACCGTAAATTCGTCACCGAATTTCAGAACTGCCTGTTCGAAAACGTGTACGGTCTCGAGTGCACCGAAGAGAACAAAATCAAGGTCTACGGCAAAGAGTTTATCGGCTGGGTGAAGCCTGAAGCCGCCGATGATTCGGTTTGGGAAGACGCCGACGACGCCTTCGCGAAGACTCCGCCGGATCCGGTTCGGTCCAGAGAGGATTTAATGGAGGAGTTCGAAGAAGCTGCAAACGGAGGGGTTCAGACCGTAACCCTAGGCGCTCTCGACAACAGTTTCATGGTCAACGACACCGGCGTTCACGTTTACCGGAATTTCAACCGCGGGATTCACGGCAAGGGAGTCTCCGTCAAATTCGACGGCCGGAATTCCCGGCAACAGACGCCGAACAAGGCGTTGTTGATGAGAGCAGAGACGAACATGCTACTGATGGGTCCTTTGAAAGATGGGAAACCTCATGCTTCGACACTTAATCAGCTTGATATTGAAACTGGGAAGATCGTGACGGAGTGGAAGTTTGAGAAGGATGGTGCTGATATAACGATGAGGGATATCACCAATGATACAAAAGGGTCTCAGTTGGATCCTTCGGAATCAACGTTTTTGGGGTTGGATGATAACAGGCTCTGTCAATGGGATATGCGTGATAGAAAAGGAATGGTTCAGAATATTGCCACGGCTAGTTCCCCCGTGTTGCATTGGAACCAGGGGCATCAGTTTTCAAGAGGAACTAACTTTCAGTGCTTTGCAACCACTGGGGATGGTTCCATTGTGGTGGGGTCTCTTGATGGGAAGATAAGGTTGTATTCGAAGACTTCGATGAGGCAAGCTAAGACTGCGTTTCCGGGGCTGGGTTCGCCGATTACCAGTGTTGATGTTACTTATGATGGCAAGTGGGTGCTGGGCACCACTGACACTTACTTGGTGTTGATTTGCACTTTGTTCACTGATAAAGATGGGAAGACAAAGACTGGGTTCGGTGGTCGTATGGGAAACAGGATAGGTGCTCCCAGATTGTTGAAGCTAACTCCTCTGGATTCGCATTTGGCTGGTGCAAGCAATAAGTTTCATGGTGGACATTTCTCATGGGTCACTGAGAATGGTAAACAAGAACGCCACCTTGTTGCGACTGTGGGCAAGTTTAGTGTGATATGGGATTTTCAGCAGGTAAAGAACAGTGCTCATGAATGTTACAGAAATCAACAAGGGCTGAAGAGCTGTTACTGTTATAAGATAGTATTGAAGGATGAATCAATTGTAGAATCACGATTTATGCACGACAAATTTGCTGTTAGTGATTCTCCAGAAGCTCCGTTGGTAGTTGCAACTCCTCTGAAAGTCAGCTCCATCAGCCTGTCTGGAAAGCGACGTGGTTAA 1863 0.4895 MGTSQSREGLEVTDSDSDHEEQREEEEEEEEQDEDAQTPSVSQSTKLDDVDAKLKALKLKYQSPSSSTKPQNVVKLYLHIGGNTPNAKWILSDKHTSYTFLKSNDNEEDENDDGEGNWALKVGSKVRSRVSSEMQLKMFGDQRRVDFVANGVWALKFPSDDTYRKFVTEFQNCLFENVYGLECTEENKIKVYGKEFIGWVKPEAADDSVWEDADDAFAKTPPDPVRSREDLMEEFEEAANGGVQTVTLGALDNSFMVNDTGVHVYRNFNRGIHGKGVSVKFDGRNSRQQTPNKALLMRAETNMLLMGPLKDGKPHASTLNQLDIETGKIVTEWKFEKDGADITMRDITNDTKGSQLDPSESTFLGLDDNRLCQWDMRDRKGMVQNIATASSPVLHWNQGHQFSRGTNFQCFATTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITSVDVTYDGKWVLGTTDTYLVLICTLFTDKDGKTKTGFGGRMGNRIGAPRLLKLTPLDSHLAGASNKFHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRFMHDKFAVSDSPEAPLVVATPLKVSSISLSGKRRG* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1662 620 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 27 1 618 IPR040458 -
Apr3g1662 620 Pfam VID27 C-terminal WD40-like domain 251 561 IPR013863 -
Apr3g1662 620 PANTHER DEM PROTEIN 1 618 - -
Apr3g1662 620 MobiDBLite consensus disorder prediction 1 48 - -
Apr3g1662 620 MobiDBLite consensus disorder prediction 18 36 - -
Apr3g1662 620 Coils Coil 16 36 - -
Apr3g1662 620 Gene3D - 310 583 IPR015943 GO:0005515
Apr3g1662 620 SUPERFAMILY Putative isomerase YbhE 318 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1662 Apr-Chr3 32164495 32168141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1662 49 618 Acyl Lipid Metabolism Gene Families AT3G19240 75.382 0.0 902
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1662 - - gmx:100819892 1036.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1662 3 32164495 32168141 Apr3g1662 3 32164495 32168141 ECH