Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1650 ATGTGGTTGCTGCCTCAACCTTCCACAACGCTCTCTCAGCTCACTGTCTCTGCTCGCGCTCTTCGTTTCACACCCTCTGCCTCCGTCACTTCTCCACCTCATGTAGCCCCTCCCAAGAAGGTTCTTCTGCCCATCGGCTTCGGCACCGAAGAAATGGAAGCCGTTATCTTGATTCACGTCCTGCGCCGCGCCGGTGCTCACGTCACTGTTGCTTCCGTCGAGCCGCAGCTCCAAGTTGAAGCCGCTGGAGGTACCAAATTGGTAGCCGATACCTCCATATCCACTTGTACCGATCAAATTTTTGATCTCATCGCTTTACCAGGAGGAATGCCTGGGTCCGCTAGATTAAGGGATTGCGATGTTCTGCGAAAAATAACATGCAAACAAGCTGAGGAAAACAGGCTCTACGGTGCTATTTGTGCTGCTCCCGCCGTCACGCTGTTGCCGTGGGGTCTTTTGAAGAAAAAGAAGATAACTTGTCACCCTGCATTCTTCGACAAGCTTCCTACCTTTTGGGCCGTTAAATCAAATATTCAGGTTTCCAGAGGGCTCACAACCAGCCGTGGGCCTGGAACTACTTACCAGTTTGCTTTATCGTTGGCTGAGCAGCTATTTGGGGAGTCTGTTGCCAAGGAGGTCGCAGAATTGTTGTTGATGAGAGCCAATGACAATAATGCAGCCAAGGAGGAGTTCAATGAAGTTGAATGGTCTGTTGGCCATCACACCCCTAGTGTCCTCATACCAATTGCACATGGTTCTGAAGAGATTGAAGTAGTGACCGTGGTAGATATTTTAAGGCGAGCAAAAGCCAATGTCATAGTTGCTTCCGTTGAAAAAACTCTTGAAGTTTCGGGTTCTCAAGGAACCAAAATAGTTGCTGATATATTAATTAGTAATGCTCAAGAGTCAACACATGATTTGATCATTCTTCCAGGAGGAACTACTGGTGCTCAAAGACTAAGCAAATCTAAAATTCTGAAGAAGCTTCTTAAAGAACAAAATTCAGCTGGAAGAATATATGGGGCGCTCTGGTCTTCACTTGCTATTCTACATAAACAAGGTTTACTAAAGGACAAGAGGGCCACAGCCCATCCCTCTACCGTAGACAAGATTAAAGATGAAGCAATAAACGGTGCTAAAGTAGTTATTGATGGCAACCTGATCACTAGTGAGGGACTTGCCACTGTAACAAATTTTGCATTGGCTATTGTAAGCAAGCTATTTGGTAATGGAAGAGCAAGAAGTGTAGCAGAAGGCCTTGTTTTTGAGTATCCTAAGGATTAG 1284 0.4611 MWLLPQPSTTLSQLTVSARALRFTPSASVTSPPHVAPPKKVLLPIGFGTEEMEAVILIHVLRRAGAHVTVASVEPQLQVEAAGGTKLVADTSISTCTDQIFDLIALPGGMPGSARLRDCDVLRKITCKQAEENRLYGAICAAPAVTLLPWGLLKKKKITCHPAFFDKLPTFWAVKSNIQVSRGLTTSRGPGTTYQFALSLAEQLFGESVAKEVAELLLMRANDNNAAKEEFNEVEWSVGHHTPSVLIPIAHGSEEIEVVTVVDILRRAKANVIVASVEKTLEVSGSQGTKIVADILISNAQESTHDLIILPGGTTGAQRLSKSKILKKLLKEQNSAGRIYGALWSSLAILHKQGLLKDKRATAHPSTVDKIKDEAINGAKVVIDGNLITSEGLATVTNFALAIVSKLFGNGRARSVAEGLVFEYPKD* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1650 427 CDD GATase1_DJ-1 41 204 - -
Apr3g1650 427 CDD GATase1_DJ-1 245 407 - -
Apr3g1650 427 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 28 425 - -
Apr3g1650 427 PANTHER PROTEIN DJ-1 HOMOLOG C 28 425 - -
Apr3g1650 427 Gene3D - 34 233 IPR029062 -
Apr3g1650 427 Gene3D - 238 426 IPR029062 -
Apr3g1650 427 TIGRFAM not_thiJ: DJ-1 family protein 245 418 IPR006287 -
Apr3g1650 427 TIGRFAM not_thiJ: DJ-1 family protein 40 215 IPR006287 -
Apr3g1650 427 Pfam DJ-1/PfpI family 39 203 IPR002818 -
Apr3g1650 427 Pfam DJ-1/PfpI family 244 405 IPR002818 -
Apr3g1650 427 SUPERFAMILY Class I glutamine amidotransferase-like 38 221 IPR029062 -
Apr3g1650 427 SUPERFAMILY Class I glutamine amidotransferase-like 244 424 IPR029062 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1650 Apr-Chr3 32007470 32012092 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1650 - - aprc:113858160 820.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1650 3 32007470 32012092 Apr3g1650 3 32007470 32012092 ECH