Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1633 ATGAGTTCGATTCATTTGATTAACACTCTTTCTGCTCCGCTTCGCTCCTTTTCTCCGTCCCTTTTTCCTCAATGCCATTCCCCTCGTCGTCCTTCCGCCGTCCCGAAACGGCGTCGTTTTTCACACTCCGCTAGGTTCCGCCTTGCCTCCGGTCCAACCGTGAATTCTGTTCCGCGCGAGAATGGAACATACACGGTTGCTGATTTCATGACAACGAAGCAAAATTTATATGTTGTCAAAACCACCACCACTGTTGATGAAGCTCTGGAGGCTCTCGTCAATAACAGAATCAGCGGTCTTCCGGTCATCGATGATGACTGGAATCTGGTTGGAGTTGTTTCAGATTATGACTTGTTAGCTATTGATTCGATATCAGGAGGTCCTCAAAGTGATGCAAATTTATTCCCCGCTGTTGATAGTTCTTGGAAAACATTCAATGAGATACAAAAGCTTCTTAGTAAGACTAATGGCAAAGTTGTCGGTGACTTGATGACTCCAACACCACTTGTTGTTCATGAATCGACTAGTCTTGAGGAAGCTGCTAGGCTGTTGCTTGAAACAAAATATCGTCGACTACCTGTGGTAGATGATGATGGAAAGCTGGTTGGACTTATTACAAGGGGGAATATTGTTAAGGCAGCCCTGTTGTCAAAACGCGCTGGAGAGTGGTGA 672 0.4554 MSSIHLINTLSAPLRSFSPSLFPQCHSPRRPSAVPKRRRFSHSARFRLASGPTVNSVPRENGTYTVADFMTTKQNLYVVKTTTTVDEALEALVNNRISGLPVIDDDWNLVGVVSDYDLLAIDSISGGPQSDANLFPAVDSSWKTFNEIQKLLSKTNGKVVGDLMTPTPLVVHESTSLEEAARLLLETKYRRLPVVDDDGKLVGLITRGNIVKAALLSKRAGEW* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1633 223 CDD CBS_pair_plant_CBSX 72 213 - -
Apr3g1633 223 ProSiteProfiles CBS domain profile. 164 221 IPR000644 -
Apr3g1633 223 SMART cbs_1 167 215 IPR000644 -
Apr3g1633 223 SMART cbs_1 75 123 IPR000644 -
Apr3g1633 223 Pfam CBS domain 66 120 IPR000644 -
Apr3g1633 223 Pfam CBS domain 160 213 IPR000644 -
Apr3g1633 223 SUPERFAMILY CBS-domain pair 63 214 IPR046342 -
Apr3g1633 223 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX2, CHLOROPLASTIC 49 220 - -
Apr3g1633 223 Gene3D - 61 220 IPR046342 -
Apr3g1633 223 ProSiteProfiles CBS domain profile. 70 129 IPR000644 -
Apr3g1633 223 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX1, CHLOROPLASTIC-LIKE 49 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1633 Apr-Chr3 31789532 31792773 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1633 - - gmx:100814621 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1633 3 31789532 31792773 Apr3g1633 3 31789532 31792773 ECH