Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1630 ATGGGTAGTAAATACAGTCCCTTACACATATTTTTCTTCCCCTTCATGGATCATGGCCATATGATACCTATGATTGACATGGCCAAACTATTTGCAGCAGAGGGTGTTAAGGCCACCATAATCACCACAACCCTCAATGCACCTTTCATTTCCAAAGCTATAGAAAAAATGCAATATAATCAAAGCCAAGAGATCGAAATCTATGCCATCAAGTTCCCAAGCACTGAGCTTGGTTTACCTGAAGGATGCGAACATGCTGACTCAATCCCTCCAGATTTATTTTCTACCTTCATTAAGGCTACTCGGTTCCTACAAGTGCCCTTTGAGCAACTATTGCATTATGAACAGCCAAATGGTGTTGTTTCTGATATGTTTTTCCCATGGACAAGTGATTCTGCCGCCAAGTATGAAATTCCTACGATTATGTTTCATGGGACTAATTTCTTCTCCTTGTGTGCCACCGAAGTAATGAGACTCTATGAGCCTTATAATAATACTTCTTCAGACTCAGAGTTATTCGTTATTCCTAATTTCCCTGGTGAAATTAAAATGACAAGGTCGCAAGTGGGAGATTTCTTCAGGAAAGATGACTTGCACTTCGTCAAATTTTGGAAAGAAGTGAAGGAGTCAGTGGAGAAAAGTTATGGGGTGGTTGTTAATAGCTTCTACGAGCTCGAGCATGTGTATGCAGATTATTATAGGAACGTACTAAAAAGAAGAGAATGGCATATTGGTTCTTTGTCTCTTTGCAATAGGAATTTAGAGGAGAAGGCATATAGAGGAAAAGAAGCATCTATTGATGAGTATGAGTGCTTAAAGTGGTTGAACACGAAAAGAGATAATTCAGTTGTTTACGTGTGCTTTGGAAGTATGACAACCTTTCCTGATTCTCAGCTTCAAGAGATTGCTATTGGACTTGAGGAGTCAAGACAACAATTCATTTGGGTTGTGGGGAAAAGAAAAGAAGATGGAGAAGAATGGTTACCTGAAGGATTTGAGAAAAGAATGGAAGGTAAGGGACTAATCATAAGAGGTTGAGCACCTCAAGTGTTAATTCTTGAACATGAAGCAATAGGGGCATTTGTGACTCATTGTGGATGGAATTCAACATTGGAAGGTGTGGCTGCTGGGGTGCCTATGGTTACTTGGCCAGTGGGTGCTGAGCAATTTTACAATGAGAAATTGGTGACTGAGGTACTTAAAATTGGGGTACCTGTTGGAGTTAAAAGGTGGAGTCACTTTGTGGGGGAAGGCATTACATGGGATGCAATAAAGAAGGCTGTGAAAATGGTAATGGTAGAGGAAGAAGCAGAGGAGAGAAACAAAGCAAAATTGTTTGCACTAATGGCAAAACAAGCTGTGGAACAAGGAGGATCCTCTTACTCAAATTTGAATGCTTTAATTGAAGAGTTGGGCTCCCTCGCCCTTTAA 1431 0.4039 MGSKYSPLHIFFFPFMDHGHMIPMIDMAKLFAAEGVKATIITTTLNAPFISKAIEKMQYNQSQEIEIYAIKFPSTELGLPEGCEHADSIPPDLFSTFIKATRFLQVPFEQLLHYEQPNGVVSDMFFPWTSDSAAKYEIPTIMFHGTNFFSLCATEVMRLYEPYNNTSSDSELFVIPNFPGEIKMTRSQVGDFFRKDDLHFVKFWKEVKESVEKSYGVVVNSFYELEHVYADYYRNVLKRREWHIGSLSLCNRNLEEKAYRGKEASIDEYECLKWLNTKRDNSVVYVCFGSMTTFPDSQLQEIAIGLEESRQQFIWVVGKRKEDGEEWLPEGFEKRMEGKGLIIRG*APQVLILEHEAIGAFVTHCGWNSTLEGVAAGVPMVTWPVGAEQFYNEKLVTEVLKIGVPVGVKRWSHFVGEGITWDAIKKAVKMVMVEEEAEERNKAKLFALMAKQAVEQGGSSYSNLNALIEELGSLAL* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1630 475 Gene3D Glycogen Phosphorylase B; 6 272 - -
Apr3g1630 475 PANTHER GLYCOSYLTRANSFERASE 7 471 - -
Apr3g1630 475 CDD GT1_Gtf-like 8 470 IPR002213 GO:0008194
Apr3g1630 475 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 273 398 IPR002213 GO:0008194
Apr3g1630 475 PANTHER UDP-GLUCOSYL TRANSFERASE 73B2-RELATED 7 471 - -
Apr3g1630 475 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 469 - -
Apr3g1630 475 Gene3D Glycogen Phosphorylase B; 273 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1630 Apr-Chr3 31769623 31771054 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1630 8 470 Glycosyltransferase AT2G15490 54.298 5.30e-180 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1630 K23260 - gmx:100779160 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1630 3 31769623 31771054 Apr3g1630 3 31769623 31771054 ECH