Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1607 ATGATAAGTTGGGGCGATCTGTACACCGTCTTAACGGCGGTGATCCCACTGTATGTGGCGATGATCTTAGCGTACGGTTCGGTTCGGTGGTGGAAGATATTCTCACCGGACCAGTGTTCAGGCATAAACCGGTTCGTGGCGATATTCGCGGTGCCACTCCTTTCCTTCCATTTCATCTCTACCAACAATCCTTACGCCATGAACTTCAGGTTCATAGCCGCGGACACGCTGCAGAAAATCATCATGCTCTTCGCCCTCGCAATCTGGACAAACTTCACCGCCAATGGAAGCCTGGAGTGGATGATCACAATCTTCTCCCTCTCCACATTGCCCAACACACTGGTCATGGGAATTCCCCTTCTCATCGCCATGTACGGAGAATATTCCGGCAGCCTCATGGTCCAAGTGGTGGTTCTCCAGTGCATCATCTGGTACACGCTCCTCCTCTTCCTCTTCGAGTACCGCGGCGCCAAACTCCTCATTATGGAACAGTTCCCTGAAACCGCCGCCTCCATCGTTTCCTTCAAAGTCGACTCCGACGTGGTTTCCCTCGACGGCCGTGACTTCCTCGAGACAGACGCCGAAGTCGGCGATGACGGAAAACTCCACGTCACGGTTAGGAAATCCAACGCTTCTAGAAGGTCCTTTATGATGACTCCCAGACCCTCTAACCTCACCGGCGCTGAGATTTACAGCCTCAGCTCCTCCCGTAACCCCACGCCACGTGGCTCCAATTTCAACCACGCTGATTTCTACTCCATGATGGGGTACGCCCCGAGGCATTCCAATTTCGGTGCTGCGGATCTTTATTCCGTTCAGTCCACGTCACGCGGCGTTACCCCGCGCCCATCGAATTTCGAAGAAAACTGTGCACCCGTGGGCCAGGCTATCAGCTCCCCCAGGTTTGGGTTTTACCCCGCCGTCCAAACAGTAGTGCCCGCCGCTTACCCGGCACCGAATCCGGAATTCTCTTCCAGTTTAACAAAGAGTGTGAGCAAAAATTCACAGCCACAGCCACAGCCACAGCCACAGCCACAGCCGCCACAGTCGCAGGTTCAAGCTCAACCTGCCAATAACAGTGCTAATAATAATAAAGCGACCCATGATGCTAAAGAGCTTCACATGTTTGTGTGGAGCTCAAGTGCTTCGCCGGTTTCCGAAGCCGGAGGGCTCCACGTGTTCACCGGCGCCGATTTCGGAGCCTCTGACCAATCTGGTCGCTCCGATCAAGGTGCTAAGGAGATTCGGATGTTGGTTGCCGACGACCACCCTCAAAATGGTGAAACCAACAAAGGTATGACTGCGGCGGAGGGAGAGTTTGGTGGGGAAGAGTTGAAATTTCCGGGGAAAGAAGGAGAACAAGGAGAGGAATTAGATCAGGGAGAGAAAGCGGAACCCACTGGGCTGAACAAGCTGGGTTCAAGTTCAACGGCGGAGCTGCACCCAAAAGCCGGCGGAGCTGCCGTGGGGAAATACATGCCTCCGGCAAGTGTGATGACCCGTCTCATACTGATTATGGTGTGGCGGAAGCTTATCCGCAACCCCAACACTTACTCCAGCCTCATTGGTGTTGTTTGGTCCCTCGTGGCATTTAGGTGGCATGTGCACATGCCTAAAATAATAGAGAAATCAATCTCCATACTGTCTGATGCTGGTCTCGGAATGGCTATGTTCAGCTTGGGTCTGTTTATGGCTCTTCAACCCAAGATAATTGCATGTGGGAACTCAGTTGCTACATTTGCCATGGCCGTTCGATTCCTTACAGGTCCCGCCGTCATGGCGGCAGCTTCCATTGCTGTTGGCTTGCGCGGTTCCCTCTTACGTGTAGCTATTGTTCAGGCTGCACTTCCACAAGGGATTGTTCCGTTTGTGTTTGCCAAGGAGTACAATGTCCATCCAGCCATTCTAAGTACAGCGGTTATATTTGGAATGTTGATAGCACTACCAATTACTCTAGTCTACTACATATTACTTGGTTTGTAA 1983 0.524 MISWGDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNNPYAMNFRFIAADTLQKIIMLFALAIWTNFTANGSLEWMITIFSLSTLPNTLVMGIPLLIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKLLIMEQFPETAASIVSFKVDSDVVSLDGRDFLETDAEVGDDGKLHVTVRKSNASRRSFMMTPRPSNLTGAEIYSLSSSRNPTPRGSNFNHADFYSMMGYAPRHSNFGAADLYSVQSTSRGVTPRPSNFEENCAPVGQAISSPRFGFYPAVQTVVPAAYPAPNPEFSSSLTKSVSKNSQPQPQPQPQPQPPQSQVQAQPANNSANNNKATHDAKELHMFVWSSSASPVSEAGGLHVFTGADFGASDQSGRSDQGAKEIRMLVADDHPQNGETNKGMTAAEGEFGGEELKFPGKEGEQGEELDQGEKAEPTGLNKLGSSSTAELHPKAGGAAVGKYMPPASVMTRLILIMVWRKLIRNPNTYSSLIGVVWSLVAFRWHVHMPKIIEKSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVATFAMAVRFLTGPAVMAAASIAVGLRGSLLRVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLVYYILLGL* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1607 660 Pfam Membrane transport protein 9 655 IPR004776 GO:0016021|GO:0055085
Apr3g1607 660 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 660 - -
Apr3g1607 660 TIGRFAM 2a69: auxin efflux carrier 1 660 IPR014024 -
Apr3g1607 660 MobiDBLite consensus disorder prediction 323 365 - -
Apr3g1607 660 MobiDBLite consensus disorder prediction 443 464 - -
Apr3g1607 660 MobiDBLite consensus disorder prediction 443 480 - -
Apr3g1607 660 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1 660 - -
Apr3g1607 660 MobiDBLite consensus disorder prediction 351 365 - -
Apr3g1607 660 MobiDBLite consensus disorder prediction 323 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1607 Apr-Chr3 31433451 31437608 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1607 1 660 Organic Solute Cotransporters AT1G70940 76.233 0.0 956
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1607 K13947 - jre:109002550 1037.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1607 3 31433451 31437608 Apr3g1607 3 31433451 31437608 ECH