Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1560 ATGGCGTCCTTGTTGGACGATATTCTACAATCCGTGGAGCTATGGCTGAAATTGGTCAAGAAGCCCCAGCCTGAGCCCTACGTCAACCCAAATTTCGACCCCGTTTTGTTGGTGCCTGGTGTCGGTGGCTCCATATTAAACGCCGTTAACGATAGCGACGGTAGCCAAGAGCGGGTTTGGGTTCGCTTTCTCTCCGCTGAGTACAAGTTGAAGACCAAGCTTTGGTCACGTTACGATCCTTCTACTGGAAAAACCTTGTCCCTGGATCCAAACTCAACAATTAAGGTTCCTGAGGATAGGCATGGACTTCATGCAATTGATATTTTGGACCCTGACTTGGTGATTGGATGTGAGTCTGTGTATTATTTCCATGACATGATTGTTGAAATGCGTAAGTGGGGATTTCAAGAGGGAAAGACACTTTTTGGCTTTGGATATGATTTTCGCCAAAGCAACAGGTTGCAGGAAACAATGGATCGGTTGGCTGCAAAGTTAGAATCAATTTATGATGCTGCAGGAGGGAAAAAGATAAACATTATAAGTCATTCTATGGGTGGTCTTTTGGTGAAATGTTTCATGTGCCTGCGCAGTGATATTTTTGAGAAATATGTGAAGAATTGGGTTGCAATTTCTGCACCATTCCAAGGTGCACCTGGATGTATCAATTCTACCTTTTTAAATGGAATGTCATTTGTGGAAGGATGGGAACAAAACTTTTATATTTCCAAATGGAGCATGCACCAATTGCTGATTGAATGTCCATCGATATACGAACTAATGGGTTGTCCTAATTTTCAATGGCAACATACTCCTGTTCTAGAATTGTGGCGTGAGAGACATAATTCCGATGGGAAATCACATATTATTCTGGAGTCATATCCACCATGTGATAGCATTGAGATTTTGAAAGAAGCACTTGTAGATAACACAGTTAGTTATGATGGCGAGGATTTGCCCCTGCCCTTCAACTTGGAGATCTTGGAATGGGCAAACAAAACGTGGGAGATTCTGTCTTCTGCCAAACTTCCCCCCGGTGTTAAATTTTACAATATTTATGGGACCAATCTTGGGACACCTCATAGTGTTTGCTATGGAAGTGGGGACAAGCCTGTCACAGATTTGGATCAACTACGATATTTTGAGGCCAAATACGTATTTGTTGATGGTGATGGAACAGTTCCAGTAGAATCAGCTAAGGCTGATGGGCTCAATGCGGAGGCAAGGGTTGGAGTGCCAGGTGAACATCGGGGTATCCTTTGCGAACCTCATGTGTTTCGGATTCTCAAGCACTGGCTGAGGGCTGGAGATCCTGATCCCTTTTACAATCCCCTCAATGATTATGTGATTCTACCTACTGCTTTTGAAATGGAGAGGCATCAAGAGAAAGGTCTAGAAGTAGCATCCCTTAAAGAGGAGTGGGAAATTATTTCCAATGACCATGATGACCAAAACAATTCTGCCAATAAAATGTCTTTGAGGTCATTATCAGTTTCGCAGGAAGGAGCCAATAATTCTTATTCTGAGGCTCATGCGACCGTCATTGTTCAGCCAGGCAATGAGGGTAAACAGCACGTTCAACTGAATGCCTTGGCTGTTTCAGTTGATGCATAA 1611 0.4327 MASLLDDILQSVELWLKLVKKPQPEPYVNPNFDPVLLVPGVGGSILNAVNDSDGSQERVWVRFLSAEYKLKTKLWSRYDPSTGKTLSLDPNSTIKVPEDRHGLHAIDILDPDLVIGCESVYYFHDMIVEMRKWGFQEGKTLFGFGYDFRQSNRLQETMDRLAAKLESIYDAAGGKKINIISHSMGGLLVKCFMCLRSDIFEKYVKNWVAISAPFQGAPGCINSTFLNGMSFVEGWEQNFYISKWSMHQLLIECPSIYELMGCPNFQWQHTPVLELWRERHNSDGKSHIILESYPPCDSIEILKEALVDNTVSYDGEDLPLPFNLEILEWANKTWEILSSAKLPPGVKFYNIYGTNLGTPHSVCYGSGDKPVTDLDQLRYFEAKYVFVDGDGTVPVESAKADGLNAEARVGVPGEHRGILCEPHVFRILKHWLRAGDPDPFYNPLNDYVILPTAFEMERHQEKGLEVASLKEEWEIISNDHDDQNNSANKMSLRSLSVSQEGANNSYSEAHATVIVQPGNEGKQHVQLNALAVSVDA* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1560 536 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 1 493 - -
Apr3g1560 536 SUPERFAMILY alpha/beta-Hydrolases 34 450 IPR029058 -
Apr3g1560 536 Gene3D alpha/beta hydrolase 83 434 IPR029058 -
Apr3g1560 536 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-LIKE 4 1 493 - -
Apr3g1560 536 Pfam Lecithin:cholesterol acyltransferase 79 399 IPR003386 GO:0006629|GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1560 Apr-Chr3 30616287 30623399 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1560 33 432 Acyl Lipid Metabolism Gene Families AT3G03310 51.117 4.45e-144 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1560 K22389 - gmx:100777083 956.822
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1560 3 30616287 30623399 Apr3g1560 3 30616287 30623399 ECH