Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1498 ATGAGGAAGCATGGATGGCAGCTACCTTACCATCCTCTTCAGGTGGTGGCTGTTGCTGTGTTTTTGGCTCTGGGGTTTGCCTTCTATGTGTTCTTCGCTCCTTTTGTTGGAAAGAAGATGTATCAGTATATTGTTATTGGTCTTTATACACCACTGATTACTAGTGTCTTTGGACTGTACATTTGGTGTGCTGCAGCAGATCCAGCAGATCCAGGGGTTTTTAAGTCCAAAAAGTATCTTAAAATCTCAGATGGTAAAAAGCTTGTTGGACTAAAGAATTCTAAATTAGGTGAAGATTCAACTTCGTCAATGCATGAAGCAAATGCTTCAACAGTTGGAGCTAATTCTGTGGATAAGGAGGCATTGGGAACTGAAGGAATGAAGAAAAGTGCTTCTGATTTAGAAGGGAAAAGCTCATCATCATCTTGTTCATCCTGTTTCCTCTTGGTTTGTTCTCCTTGTGCTTATATCTGCAGCTGCTCTAGTTCGAGTGAAGAAACTTCTGATAAACAAATAAGTGAAGATGGCATGTTCTATTGCAGTTTGTGTGAAGTTGAGGTTTTTAAGTACAGCAAGCACTGTAGAGTTTGCGACAAATGTGTAAATCACTTTGATCATCATTGCCGGTGGCTTAACAACTGTATTGGGAAAAGGAACTATCGACAATTTTTCACCCTCATTGTTGCTGCTATGCTCTTGTTTATTCTTCAATCGTTGACTGGGATACTTGTGCTTATCTGCTGCTTTGTCAAGAGGAAGCAATTTTCTATGGATATCTCCTCCAAGTTGGGAACCAGTTTCTCTGTGGTTCCCTTTGTTCTTGTGGTGTCTGTCTGCACCATTCTGGCCATGATTGCTACCTTACCCGTTGCTCAGCTTTTCTTCTTTCATATCCTCCTGATTAGAAAGGGACTCAGCACATATGATTACATCATAGCTATGAGGGAGCAGGAGCAGGAGCAGCTAGGAATTGGAGGTCAGCAGAGTCCCCAAATGTCAACTGTTAGCTCACTTACTGGATTGAGTAGTACAAGCTCCTTTAATACTTTACACCGTGGTGCATGGTGCACACCCCCACGCCTCCTCCTTGAAGATCAGTTTGATGTGGTGCCTCCAGAAACAGGTTCTGTAAGTTCATTAGGAAAGAAGATAATGAGAGAAGAGCCATCCAAGAAAAAGAATCCTGGAACAGTGAAAATTAGTCCTTGGACATTGGCACGGTTAAACGCAGAAGAGGTTTCTAAGGCTGCTGCAGAAGCAAGAAAAAAATCCAAAATTCTGCAGCCTGTAATAAGACATGACGAAGCTATCAGGCTAGAACCAGATAGCAGTTTTGGTAGCAGTGGTCGAAGAATGGTCCCCAGGATTGATAACAACAATAAAAAGCGAGCGAGCAAGCGGCTCTACCTTCCTGCTGACTTATCTATGGAGTCCCTGACAAAAGTTTCTGCCAATAATACTGATCAAGGTTCAAGTACAATGTCTAGGTTGGCCCCTCTTCAGTTTGAAGCACGTAGTGCATTTCAAACAAGTCGAGCAATGTCAAGCTCGGCTGGGATTGTTCCTTCATCTCCTGAAAGCAGTTTAGACTCTCCTGATATTCACCCTTTTCGGGTGTCTTCATCAAGAGCCGAAGAAGTTAGACAGCTTGCAGGTATTTCAGCTGCTGGTGGTGTAACTCTGAAGGAACTTCCACTCTCAAGGTCAACCAGTGATGGATATGAGGCTTCTGGTGGGGAAGATAGTGACCAGGTTCCTAGTAGGATGGTTCAGAGATCTACCAATTGGACTAATCTCCTTTTCAGTGTTGATCAGGATGAGAGGGCTTTCAATAAGCCTCAACCCTCATCCAGTGTGGGTTATAGTAGAAAGTTATGA 1878 0.4308 MRKHGWQLPYHPLQVVAVAVFLALGFAFYVFFAPFVGKKMYQYIVIGLYTPLITSVFGLYIWCAAADPADPGVFKSKKYLKISDGKKLVGLKNSKLGEDSTSSMHEANASTVGANSVDKEALGTEGMKKSASDLEGKSSSSSCSSCFLLVCSPCAYICSCSSSSEETSDKQISEDGMFYCSLCEVEVFKYSKHCRVCDKCVNHFDHHCRWLNNCIGKRNYRQFFTLIVAAMLLFILQSLTGILVLICCFVKRKQFSMDISSKLGTSFSVVPFVLVVSVCTILAMIATLPVAQLFFFHILLIRKGLSTYDYIIAMREQEQEQLGIGGQQSPQMSTVSSLTGLSSTSSFNTLHRGAWCTPPRLLLEDQFDVVPPETGSVSSLGKKIMREEPSKKKNPGTVKISPWTLARLNAEEVSKAAAEARKKSKILQPVIRHDEAIRLEPDSSFGSSGRRMVPRIDNNNKKRASKRLYLPADLSMESLTKVSANNTDQGSSTMSRLAPLQFEARSAFQTSRAMSSSAGIVPSSPESSLDSPDIHPFRVSSSRAEEVRQLAGISAAGGVTLKELPLSRSTSDGYEASGGEDSDQVPSRMVQRSTNWTNLLFSVDQDERAFNKPQPSSSVGYSRKL* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1498 625 PANTHER S-ACYLTRANSFERASE 8 534 - -
Apr3g1498 625 MobiDBLite consensus disorder prediction 441 464 - -
Apr3g1498 625 ProSiteProfiles DHHC domain profile. 178 228 - -
Apr3g1498 625 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 8 534 - -
Apr3g1498 625 MobiDBLite consensus disorder prediction 604 625 - -
Apr3g1498 625 Pfam DHHC palmitoyltransferase 178 311 IPR001594 GO:0016409
Apr3g1498 625 MobiDBLite consensus disorder prediction 564 591 - -
Apr3g1498 625 MobiDBLite consensus disorder prediction 515 536 - -
Apr3g1498 625 MobiDBLite consensus disorder prediction 515 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1498 Apr-Chr3 29692739 29699885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1498 166 221 Lipid Metabolism Gene Families AT4G22750 41.071 9.42e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1498 K20027 - gmx:121174263 956.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1498 3 29692739 29699885 Apr3g1498 3 29692739 29699885 ECH