Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1492 ATGATGTTGACGATGATTGGGGTAGCCCACAAACCCCTCTTGCATCTCTCTCTTGTAATTTTGATGCTGTTTTCTTCTTCAACTGAATCTCTCAGATTCGAACTCCAATCCGGTCACACCAAATGCATCTCCGAAGACATCAAAAGCAATTCCATGACAGTGGGCAAGTATCAAATCGTCAACCCCAACGACGGTCACCCCCTACCTGATTCCCACAGAGTCACCGTTCGGGTGACTTCGTCTTATGGGAACAACTATCACTATGGGGATCGCGTTCAAACGGGTCAGTTTGCGTTCACGGCAGCGGAAGCTGGAGACTACATGACTTGTTTTTGGGCCGTGGATAACAATCCCCCAATAACTATGACCATTGATTTTGATTGGAAAACTGGTGTGGCAGCCAAGGACTGGTCTAATGTTGCTAAGAAAGGCCAAGTTGATGTTATGGAGCTAGAACTAAAGAAGTTGCAGGACACTGTGGCTTCTATTCATGATGAGATGTTTTATCTTCGGGAAAGAGAAGAAGAAATGCAAGAGCTCAACAGAACAACCAACAGCAGAATGTTCTGGTTGAGTTTGCTATCGCTCTTTGTGTGCTTATCAGTAGCAGGGTTGCAACTATGGCATCTGAAGACCTTCTTCGAGAAAAAGAAACTCATTTAA 663 0.448 MMLTMIGVAHKPLLHLSLVILMLFSSSTESLRFELQSGHTKCISEDIKSNSMTVGKYQIVNPNDGHPLPDSHRVTVRVTSSYGNNYHYGDRVQTGQFAFTAAEAGDYMTCFWAVDNNPPITMTIDFDWKTGVAAKDWSNVAKKGQVDVMELELKKLQDTVASIHDEMFYLREREEEMQELNRTTNSRMFWLSLLSLFVCLSVAGLQLWHLKTFFEKKKLI* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1492 220 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN P24DELTA7 16 220 - -
Apr3g1492 220 Pfam emp24/gp25L/p24 family/GOLD 30 215 IPR009038 -
Apr3g1492 220 Coils Coil 146 166 - -
Apr3g1492 220 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 16 220 IPR015720 -
Apr3g1492 220 ProSiteProfiles GOLD domain profile. 40 155 IPR009038 -
Apr3g1492 220 SMART EMP24_GP25L_2 30 215 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1492 Apr-Chr3 29603415 29606308 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1492 K20352 - gmx:100817584 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1492 3 29603415 29606308 Apr3g1492 3 29603415 29606308 ECH