Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1491 ATGAAGGGTATTCAGGTGAGATGCGACAAGCTTCAGGGTTCAGTGATTCCGAGGAGCCGTTTGCGGGTTTGGTTCATTCGAGTGTGTTCAAGCATTGTGCTATGGACATGCCTGGTTCAGTTAGTGACAGTTAGTGAACTTTGGCATTCCCGTTTCCTTTTTGGGATTACTAGTCGAATATATCACACTACACAACGTCCTCTCCGACCACAAAATGCACTTTCTCAACCTCCTCCTCCTTTTCTTCCTGCAAGAAATTATACAAGGAATGGTTTTCTAAGAGTCTCCTGCAATGGGGGATTGAATCAAATGCGGGCAGCGATTTGTGATATGGTGACAGTTGCTCGATTTTTGAATCTAACGTTGGTTGTTCCGGAGCTTGATAAGAAATCCTTTTGGGCAGACCCTAGTAATTTCGAGGACATTTTTGACGTGAGACATTTCATTTATTCTTTACGAGATGAAGTTCAAATACTGAAGAGAGTACCCAAAAGGGTTAGTAGGAAAAGTGGATACTTCACCCTCGAGATGCCTCCTGTTAGCTGGTCTAATGAAAAATATTACTTGGAGCAGATTCTGCCACTTTTTGGCAAGCATGAGGTGGTACACTTCAACAAAACTGATTCACGTCTAGCAAACAATGGTCTCCCGCTTGAACTACAGAAACTTAGGTGTCGTGTTAATTACCAAGCTCTTAAGTTCACTCCTCAAATTGAGAATTTGGGCCAAAAATTGATTCAGATACTTCGTCAGAAGGGATCTTTTGTGGCATTGCATCTGAGATATGAGATGGACATGTTGGCTTTCTCAGGTTGTACTCTTGGTTGTACTGATGAAGAAGCTGAGGAGCTCAAGCGGATGAGGTATGCATTCCCTTCCTGGAGAGAAAAGGAGATAGTCTCTGAAGAGAGGAGATCACAGGGTTTCTGTCCTTTGACACCAGAGGAGGCAGCCCTAGTTATGCAAGCCTTAGGTATTGATAAGGAAACACAGATTTATATTGCAGCTGGTGAGATTTATGGTGGTGAACGAAGACTAGCACAGCTTAGAGCTGCCTTTCCAAGAATTGTTAAAAAGGAGACATTGCTGGCCCATGATGAGTTGCAGCAGTTTCAGAATCATTCGTCACAGATGGCAGCTTTGGATTTTATGGTTTCAGTAGCCAGTAACACCTTTATTCCTACCTATTATGGGAACATGGCAAAACTTGTGGAAGGCCATCGAAGGTATTCTGGTTTTAAAAAATCCATCTTATTGGATCGAAAAAAGCTTGTAGAATTTCTTGATATGCATCAAAATGGTACCCTTCCATGGAATGAGTTTGCAAATGCTGTGCAAGAGGTTCATGAAAAGAGAATGGGCCAGCCAGCTTATCGTAGAGTTATTGTAGACAAGCCGAAGGAGGAGGATTATTTCTATGCCAATCCTCATGAATGCCTCTGTGAGGAAACCAAGTGTGATGACTTGCTAAGTCCTCTTAACTCTAGTCAAATACGATGA 1500 0.4247 MKGIQVRCDKLQGSVIPRSRLRVWFIRVCSSIVLWTCLVQLVTVSELWHSRFLFGITSRIYHTTQRPLRPQNALSQPPPPFLPARNYTRNGFLRVSCNGGLNQMRAAICDMVTVARFLNLTLVVPELDKKSFWADPSNFEDIFDVRHFIYSLRDEVQILKRVPKRVSRKSGYFTLEMPPVSWSNEKYYLEQILPLFGKHEVVHFNKTDSRLANNGLPLELQKLRCRVNYQALKFTPQIENLGQKLIQILRQKGSFVALHLRYEMDMLAFSGCTLGCTDEEAEELKRMRYAFPSWREKEIVSEERRSQGFCPLTPEEAALVMQALGIDKETQIYIAAGEIYGGERRLAQLRAAFPRIVKKETLLAHDELQQFQNHSSQMAALDFMVSVASNTFIPTYYGNMAKLVEGHRRYSGFKKSILLDRKKLVEFLDMHQNGTLPWNEFANAVQEVHEKRMGQPAYRRVIVDKPKEEDYFYANPHECLCEETKCDDLLSPLNSSQIR* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1491 499 PIRSF UCP009360 6 477 IPR024709 -
Apr3g1491 499 PANTHER OS02G0726500 PROTEIN-RELATED 17 498 - -
Apr3g1491 499 Pfam GDP-fucose protein O-fucosyltransferase 92 410 IPR019378 -
Apr3g1491 499 CDD O-FucT_plant 92 416 IPR024709 -
Apr3g1491 499 PANTHER O-FUCOSYLTRANSFERASE FAMILY PROTEIN 17 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1491 Apr-Chr3 29579041 29586089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1491 90 499 Miscellaneous Gene Families AT2G37980 48.058 4.69e-136 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1491 K23280 - gmx:100818652 910.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1491 3 29579041 29586089 Apr3g1491 3 29579041 29586089 ECH