Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1489 ATGAAGTTTGGCAAAGAATTTGCATCCCAAATGGTGCCAGAATGGCAAGAAGCATACATGGATTATGGTTATCTAAAATCCCTTTTGAAAGAAATCCTGCACAACCAGCAAAGCAAGAAGCCACATCCAAGTGCCACCCCAACAATTCTAAAGAGAAAGTTATCACTTTATAGAGCTTTCAGTGGTCTCACTCAGAGACACTACCAACCCTTGACCCCTTCAGAACAGGACATTGAGAACCAACCCATTTTGGTGCACTCAGTGCTGCGAGATGGTCATGAAAAATATGAAACTACCTTTCTCATGGCTGCAGAAGAAGGTGGAGAATATGAGTTAGTGTACTTTAGGAGGCTAGATGATCAGTTCAACAAAGTGGACAAGTTCTATAGATCTAAAGTGGAAGAAGTGATGAAGGAAGCAGTTGAGTTAAACAAACAAATGGATGCTTTAATAGCTTTCAGGGTAAAAGTTGAGAACCCAACTACTGAGTCATTTGATAGCTCAGTTGAGATGACTCATCTGGAATTATATGAATCGGGCAATGACATAGGCGAAGAGATTCAAACTCCCAACCAAAGAGATGAAGTACAGAACACAAAGAAGAATATCAAAGCCAACAAACCAGCTCCTTTGGAAGTGCTTAAGCGAGTGCAATTAAATAACGCTTGTGAGACTCCTCGTTCAACTATAAAAGGCTTCATCAAATACCCTGGCCAAACAAAGCTGAAATTCACTAAGGAAAATTTAAGCAAAGTAGAAGAAAAACTCAAACGGGCTTTTGTTGAGTTCTATCACAAGCTTCGACTTCTCAAGAACTACACCTTTCTAAATATATTGGCTTTTTCAAAGATAATGAAGAAATATGATAAGATTACATCAAGGGGTGCGGCAAAAGCTTACATGAAAATGGTTGATAAGTCCTACCTTGGGAGCTCTGATGAGGTCACTAGGCTTATGGAGAGGGTGGAAAAAGTATTCATTAAGCACTTTTCCAACTCAAATAGAAATAAAGGAATGAGCATCTTGAGACCAAAAAGAAAGAGAGAAAGGCATAGGATTACATTTTCCATGGGCTTCTTTGCTGGATGCACTGCAGCTCTAACATTAGCTCTTATTCTGATTGTTCGTACTCGAAAAATCATGGATCATTCAGGAAGTACCAAATACATGGAAATCATGTTTCCTCTTTACAGTTTATTTGGATTTGTAGTTCTACACATGCTGATGTATGCTGCTAATATATACTTCTGGAGGCGATATAGAGTGAATCACTCATTCATATTTGGTTTAAAGCAAGGCACTGAGTTAGGCTACCATCAAGTCCTTCTTCTTAGTTTTGTCCTTGCAGCATTGGCACTAGCCAGCGTGCTTGCAAACTTAGACATGCAAATCGATCCAGAGACAAAAGATTATGTAGCATTCACTGAACTTATGCCACTGATTCTGGTTCTTGTTGTGATTGCTATTTTATTATGCCCATTAAACATCATATGTCGATCAAGCCGAATGTTTTTCCTTACATGTCTGTTTCACTGCCTCTGTGCTCCTCTATACAAGGTCACACTGCCAGATTTTTTCTTGGCAGATCAATTTACTAGCCAGGGGCAAGCCTTAAGGAGTTTTGAGTTCTACATATGCTACTATGGTTGGGGTGACTTCAAACAAAGACAAACCACATGCCAGTCAAATAGCATATTCTTAACTTTTTCATTCATTGTTGTTGTGATTCCATACTGGTCTCGTTTTCTTCAGTGTCTAAGGCGCCTGTTTGAGGAGAAAGATAGAATGCAAGGATATAATGCATTCAAGTATTTCCTCACTATTGCAGCTGTGTGCCTTAGGACAGCTTATAGTCTTGACAAGGGAATGGGTTGGAAAGTGTTGGCATGGATGTTCTCAGTATCTACAGCCATTTTTTCCACATATTGGGACCTTGTCATTGATTGGGGCCTTCTGCAAAAACATTCCAAAAACCGTTGGCTCAGAGACAAACTCCTAATCCCTCAGAAAAGTGTATATTTCGCAGCCATGGTGTTAAATGTGTTGTTGAGATTTGCATGGTTGCAGACAGTATTGAATTTCAAATTTTCCTTCTTGCACAAGCAAGCCATGATCAGCATCATAGCCAGCTTAGAGATCATTCGCCGTGGCATATGGAACTTCTTTAGGGTGGAGAATGAGCATTTGAACAATATTGGCAAGTACCGTGCATTCAAGTCTGTGCCACTACCCTTCAACTACGAGGAAAATGAAGACAAAGATGAGTAA 2268 0.3977 MKFGKEFASQMVPEWQEAYMDYGYLKSLLKEILHNQQSKKPHPSATPTILKRKLSLYRAFSGLTQRHYQPLTPSEQDIENQPILVHSVLRDGHEKYETTFLMAAEEGGEYELVYFRRLDDQFNKVDKFYRSKVEEVMKEAVELNKQMDALIAFRVKVENPTTESFDSSVEMTHLELYESGNDIGEEIQTPNQRDEVQNTKKNIKANKPAPLEVLKRVQLNNACETPRSTIKGFIKYPGQTKLKFTKENLSKVEEKLKRAFVEFYHKLRLLKNYTFLNILAFSKIMKKYDKITSRGAAKAYMKMVDKSYLGSSDEVTRLMERVEKVFIKHFSNSNRNKGMSILRPKRKRERHRITFSMGFFAGCTAALTLALILIVRTRKIMDHSGSTKYMEIMFPLYSLFGFVVLHMLMYAANIYFWRRYRVNHSFIFGLKQGTELGYHQVLLLSFVLAALALASVLANLDMQIDPETKDYVAFTELMPLILVLVVIAILLCPLNIICRSSRMFFLTCLFHCLCAPLYKVTLPDFFLADQFTSQGQALRSFEFYICYYGWGDFKQRQTTCQSNSIFLTFSFIVVVIPYWSRFLQCLRRLFEEKDRMQGYNAFKYFLTIAAVCLRTAYSLDKGMGWKVLAWMFSVSTAIFSTYWDLVIDWGLLQKHSKNRWLRDKLLIPQKSVYFAAMVLNVLLRFAWLQTVLNFKFSFLHKQAMISIIASLEIIRRGIWNFFRVENEHLNNIGKYRAFKSVPLPFNYEENEDKDE* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1489 755 Coils Coil 242 262 - -
Apr3g1489 755 ProSiteProfiles EXS domain profile. 561 755 IPR004342 GO:0016021
Apr3g1489 755 PANTHER XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED 185 755 - -
Apr3g1489 755 PANTHER XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED 1 175 - -
Apr3g1489 755 CDD SPX_PHO1_like 2 298 IPR034092 -
Apr3g1489 755 Pfam SPX domain 1 304 IPR004331 -
Apr3g1489 755 ProSiteProfiles SPX domain profile. 1 302 IPR004331 -
Apr3g1489 755 PANTHER PHOSPHATE TRANSPORTER PHO1 HOMOLOG 3 1 175 - -
Apr3g1489 755 PANTHER PHOSPHATE TRANSPORTER PHO1 HOMOLOG 3 185 755 - -
Apr3g1489 755 Pfam EXS family 393 729 IPR004342 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1489 Apr-Chr3 29566872 29571424 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1489 - - gmx:100819185 1230.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1489 3 29566872 29571424 Apr3g1489 3 29566872 29571424 ECH