Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1465 ATGGCTCCATCTCTACTCATATACTCGTTCCTCATTCTCACAGTCATCACATTCTCCACACCCACACAGTCACTTTTTCTAACCCTCGTTAACAACTGCAACTACACCGTCTGGCCCGCCATCCAGCCCAATGCCGGCCACCCAGTTCTCGCAGGCGGCGGCTTCGTCCTCCACACCCTCACCCACCAGTCCATCCCCGTACCCGACACCCATTGGTCGGGCCGGGTCTGGGCCAGAACCGGCTGCGGTTACAACGGCAACCACTTCTCCTGCGTCAGCGGCGACTGCGGCGGCCGCCTCCAGTGCAACGGCGCCGGCGGCTCCGCCCCCGCCACGCTGGCACAGTTGGAAGTGCATCACGGTAACGGCGACTTCTCCTCTTACGGCGTTAGCCTCGTCGACGGTTTTAACGTCCCCATGACGGTCACACCGCACGAGGGGAAAGGCATGTGTCCCGTCGTGGGTTGTCGTACCGATTTAGTTGCCACGTGTCCTCCTCCGCTGCAGCACCGTGTACCCGCAGGTCACGGTCCTGTGGTGGCGTGTAAGAGTGGGTGCGAAGCTTTTCACACGGATGAGTTGTGCTGTAGGAACCATTACAACAACCCCCAAACGTGTAAGGCCTCGGTGTACTCCACTTTCTTTAAACACGCATGTCCTTCCACGTTTACCTTCGCGCATGATAATCCTTCGCTCATGCACCAGTGTTCCTCCCCGCGCGAGCTTAAGGTTATCTTTTGCCATTGA 747 0.585 MAPSLLIYSFLILTVITFSTPTQSLFLTLVNNCNYTVWPAIQPNAGHPVLAGGGFVLHTLTHQSIPVPDTHWSGRVWARTGCGYNGNHFSCVSGDCGGRLQCNGAGGSAPATLAQLEVHHGNGDFSSYGVSLVDGFNVPMTVTPHEGKGMCPVVGCRTDLVATCPPPLQHRVPAGHGPVVACKSGCEAFHTDELCCRNHYNNPQTCKASVYSTFFKHACPSTFTFAHDNPSLMHQCSSPRELKVIFCH* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1465 248 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 7 248 - -
Apr3g1465 248 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Apr3g1465 248 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Apr3g1465 248 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Apr3g1465 248 PRINTS Pathogenesis-related protein signature 238 247 IPR001938 -
Apr3g1465 248 SMART tha2 27 248 IPR001938 -
Apr3g1465 248 PANTHER OS03G0233200 PROTEIN 7 248 IPR001938 -
Apr3g1465 248 PIRSF PR5 1 248 IPR001938 -
Apr3g1465 248 SUPERFAMILY Osmotin, thaumatin-like protein 26 247 IPR037176 -
Apr3g1465 248 Pfam Thaumatin family 31 247 IPR001938 -
Apr3g1465 248 CDD TLP-PA 27 247 - -
Apr3g1465 248 ProSiteProfiles Thaumatin family profile. 27 248 IPR001938 -
Apr3g1465 248 Coils Coil 248 248 - -
Apr3g1465 248 Gene3D Thaumatin 26 247 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1465 Apr-Chr3 29270144 29270963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1465 18 247 Receptor kinase-like Gene Family AT5G38280 36.170 4.34e-42 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1465 - - gmx:100818233 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1465 3 29270144 29270963 Apr3g1465 3 29270144 29270963 ECH