Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1452 ATGTCGTTCACTTCTAGTTCCAGGGGAGGAATAACGACGGACCCCCAAATCTCAAAGAAATGGACACACAGAGAAACAAGTCCGGAAAGAACCAAAGTTTGGACCGAGCCCAAGCCCAAAACGCCCAGAAGAGTCTCCGTCGTTTACTACCTCTCCCGGAATGGCCAACTCGAGCACCCTCATTTCATGGAGGTTCCTCTCTCCTCTCCTCATGGGCTCTACCTCAAAGACGTTATCAATCGTTTGAACCTTCTCCGCGGGAAAGGCATGGCCACCATGTACTCTTGGTCCGCCAAACGGAGCTACAAAAACGGCTTCGTTTGGCACGATTTGTCGGAGAACGATTTCATCTACCCCACGCAGGGGCAAGACTACATTCTCAAAGGATCGGAGATTCTCGATCACGCTGCTTCTGCCGCGAGGTCTAACAAATCCGAGGACGATTCCGATTCTCCGGTGGTCATCACCAGGCGGCGCAACCAGTCGTGGAGCTCCATAGACTTGAACGAGTACCGAGTTTACAAGTCCGAATCGTTCGGTGATTCGGCCGGGAAAATCGCCGCCGACGCGTCGACTCAGACGGACGACAAGCGGAGGCGGAGGAGGACGGCGAGGGAAAAGGAAGGAGAAGAAGAGAAGAGTGAAATTGAAGTGGAGATGGAGGGAGAGAGGGTTCCGCACGGGACGTGTCATAATCAGAGTACGGAACTGAGTAGAGAAGAGATCTCGCCTCCACCGTCGGATTCGAGTCCCGAGACGCTGGAGACGTTGATGAAGGCTGATGGACGGCTGGGATTGCGATGTTCGGAAAATGAAAAGGAAAATCTAGCGGCTGAGAGCTTTCCTAGTGGGAGGATGAGGGCTTCATCGGTTCTGTTGCAGTTGTTATCGTGCGGTGCCGTGTCTTTCAAGGGTAACTCGGTGAAAGATGAAGGGTTCTCGTTGGTGGGGCACTACAAGTCGAGGTTGCCCCGCGGAGCAGGGAATCATGAGGGCAAGGAAGCTGGGACAATAATGGAAATTCCAGATTTGAGCAGGGTAAGGTTGGAAGATAAAGAGTATTTTAGTGGGAGTTTGATCGAAACCAAAAAAGTGGAAGCCCCTGGTTTGAAAAGATCTTCTTCTTACAATGCAGATAGCGGTTCCCGGTTGCAAATCGTCGATCATGAAGGAGAAGTCGTGCGGGCAAAGTGCATACCGCGGAAGTCCAAGACACTTCAAACAAAGAAAGAAGAGGGTGCTTCCATGCATATTGTTAGCAGTAGCCAACACGGGAGCAAAAGATTTGAAGCACAAAAATAA 1302 0.5131 MSFTSSSRGGITTDPQISKKWTHRETSPERTKVWTEPKPKTPRRVSVVYYLSRNGQLEHPHFMEVPLSSPHGLYLKDVINRLNLLRGKGMATMYSWSAKRSYKNGFVWHDLSENDFIYPTQGQDYILKGSEILDHAASAARSNKSEDDSDSPVVITRRRNQSWSSIDLNEYRVYKSESFGDSAGKIAADASTQTDDKRRRRRTAREKEGEEEKSEIEVEMEGERVPHGTCHNQSTELSREEISPPPSDSSPETLETLMKADGRLGLRCSENEKENLAAESFPSGRMRASSVLLQLLSCGAVSFKGNSVKDEGFSLVGHYKSRLPRGAGNHEGKEAGTIMEIPDLSRVRLEDKEYFSGSLIETKKVEAPGLKRSSSYNADSGSRLQIVDHEGEVVRAKCIPRKSKTLQTKKEEGASMHIVSSSQHGSKRFEAQK* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1452 433 MobiDBLite consensus disorder prediction 228 253 - -
Apr3g1452 433 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 17 403 IPR010369 -
Apr3g1452 433 PIRSF UCP031043 13 424 IPR021182 -
Apr3g1452 433 MobiDBLite consensus disorder prediction 1 38 - -
Apr3g1452 433 MobiDBLite consensus disorder prediction 1 17 - -
Apr3g1452 433 MobiDBLite consensus disorder prediction 404 433 - -
Apr3g1452 433 MobiDBLite consensus disorder prediction 191 226 - -
Apr3g1452 433 PANTHER OS01G0839200 PROTEIN 17 403 - -
Apr3g1452 433 MobiDBLite consensus disorder prediction 414 433 - -
Apr3g1452 433 Pfam Protein SOSEKI, plant 45 380 IPR010369 -
Apr3g1452 433 MobiDBLite consensus disorder prediction 18 38 - -
Apr3g1452 433 MobiDBLite consensus disorder prediction 185 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1452 Apr-Chr3 29186535 29189243 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1452 - - gmx:100779732 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1452 3 29186535 29189243 Apr3g1452 3 29186535 29189243 ECH