Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1444 ATGGCGGAAACAACCACTTCTTCCCTTTCTTCTTCGGCTGATTGGAATTGGAGACACATCAAGTTGTGGAAAGGCACATTTGCTGTCACCGGAATCATGCTCACTCTCGTTACCTATGGCGTCTTGCAGGAAAAGATCATGAGAGTCCCATATGGGGTGGACAAGGATTACTTCAAATATTCTCTTTTTCTTGTTTTCTGTAACCGCATCACCACGTCTGCTGTTTCTGCAGGTGCTTTACTGGCTAGTAAAAAGGCATTGGATCCTGTAGCTCCCATTTATACGTATTGCCTTGTGTCAGTTTCAAACATACTGACTACAACTTGTCAGTACGAGGCCCTCAAATATGTTAGTTTCCCTGTTCAGACTCTTGCAAAGTGTGCTAAAATGATACCAGTTATGGTCTGGGGCACTCTCATAATGCAGAAGAGATATCAGGGAAATGACTATTTGTTGGCCTTTTTAGTAACCCTTGGCTGCTCAGTATTCATCCTGTATCCAGCAGGGACGGATATAAGTCCATACGGTAGAGGAAGGGAAAATACTGTTTGGGGCATTTTCCTAATGATTGGTTACCTTGGGTGTGATGGCTTTACAAGTACATTCCAAGATAAGCTGTTTAGAGGGTATGAAATGGAGATACATAATCAGATATTCTATACAACTTTGTGTTCCTGTATTCTTAGTCTGACAGGTCTTATCTTACAAGGACATTTATTACCAGCAGTAGAGTTTGTTTATCGCCATAATGATTGTTTCTTTGACATTGCATTGCTTTCGACTGTTGCAACAGCTAGTCAATTTTTTATTTCCTATACAATTCGAACTTTTGGTGCTCTGACATTTGCTACTATAATGACAACTAGACAGTTGGTAAGCATCATGCTGTCATGTGTGTGGTTTGCGCATCCTCTTAGCTGGGAACAGTGGATTGGAGCTGTAATTGTCTTTGGCGCCATTTATGCAAAAAGCTTCTTGAGGAAAGCACCCCAAAAGACAACCCCTTCTGTAGAACTTGTACAAAATGAAATTCCAAATAATTTGAAGAACCCTTGA 1056 0.4091 MAETTTSSLSSSADWNWRHIKLWKGTFAVTGIMLTLVTYGVLQEKIMRVPYGVDKDYFKYSLFLVFCNRITTSAVSAGALLASKKALDPVAPIYTYCLVSVSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMVWGTLIMQKRYQGNDYLLAFLVTLGCSVFILYPAGTDISPYGRGRENTVWGIFLMIGYLGCDGFTSTFQDKLFRGYEMEIHNQIFYTTLCSCILSLTGLILQGHLLPAVEFVYRHNDCFFDIALLSTVATASQFFISYTIRTFGALTFATIMTTRQLVSIMLSCVWFAHPLSWEQWIGAVIVFGAIYAKSFLRKAPQKTTPSVELVQNEIPNNLKNP* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1444 351 PANTHER SOLUTE CARRIER FAMILY 35 MEMBER B 19 341 IPR013657 GO:0055085
Apr3g1444 351 Pfam UAA transporter family 26 324 IPR013657 GO:0055085
Apr3g1444 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 256 322 - -
Apr3g1444 351 PANTHER UDP-GALACTOSE/UDP-GLUCOSE TRANSPORTER 5 19 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1444 Apr-Chr3 29139530 29144459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1444 18 343 Organic Solute Cotransporters AT5G59740 81.098 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1444 K15276 - gmx:100782423 625.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1444 3 29139530 29144459 Apr3g1444 3 29139530 29144459 ECH
Apr2g2263 2 27729375 27735751 Apr3g1444 3 29139530 29144459 PCT