Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1427 ATGGACGACGAATTGCTTGAACTGCAGCGACAATTCGAGTTCGCGCAGCAAGCGAAGTCCAGTATCCGATTATCGGAGCGAAACGTCGTCGAATTGGTCCAAAAATTGCAGCATCTCCAAATCATCGATTTCGAGCTTCTCTACACTGTCTCTGGCAAAGAGTACATCACTCTCGATCAACTGAGGAACGAGATGGTGGCTGAGGTGAAGAAATTAGGGCGTGTTTCTTTGATCGATCTCGCTGACGCTACTGGAGTTGACTTGTTTTATGTGGAGAAGCAGGCTCAGAACGTAGTAACGGATCACCGAGAATTGATGTTGACTCAAGGCGAGATCATGTCTGAGTCTTACTGGGATTCAATTGCTGAAGAGATTAATGAGAGGCTTCAAGAATGTAGTCAAATTGCGCTGACGGAACTCGCTGCGCAATTGAACGTTGGTTTAGACTTGGTTGCGTCCATGTTGGAGCCGCGCCTGGGCACTATGGTGAAGGGAAGGCTTGAAGGTGGACAGTTGTATACTCCTGCCTATGTAGCTCGTGTTAGTGCCATGGTTCGAGGTGCTGCGCGGGGCATCACGGTTCCAACAAATTTGACGGTGTTATGGAGCTCGTTGCAGCAGTTACTGCAAGAAATGGATGGAACCAGCGGTTTGGCTGTTGAAGGATCGTTCTTTCAGTCTTTGTTTAATGGACTTGTGAAGGAAGGCGAGATTCTAGGGTCACTTCGTGCAGGAGTGCATTGGACGCCTGCTGTATTTGCTGTTGCTCAAAAGGAATTCGTAGATTCATTCTTTTCACAGAATTCTTTTATCAGCTATGAGGCTCTGCACAAACTTGGAATTCCCCAGCCCATTCAATTCTTGCAGTCCAGATATCCTGAAGGCAAACCTCTAGTTACAACATTTGTTCACCCATCTATGATTGAGATGCTAGATGCTGCTACTGAGGATGCTCTCGAGCGTGGTAGCTGGAGTGATTCTCTTTCCTTATTGCCCTCATCTTTTACACCTCAAGATGCATCTAAAGTGCTGTCTCTGTGTCAATCTGTTCAAAATGGTCTTAAGTCTAACAAAGCACACATTTTTGGAGATTTTTATGTGTTGAGCAGCAGCTTTATAAAGGACATCTGTGATCGCATGGTGAAAGAATTGGAGACATTAGGTATTTCAGGGTCTTTTGGCACTATGATGATGCCTGGTGATTTACAAGTAGCCAATGAAGCTAAGAAAGGGAATGATTCAAGCCGTTTGAATGAGTGCAATGAGATGGTGAGTGATGTTGGTGCCAACAAGCATGCTGATAAAGGAACAAAGAAGAAAAAGGGGAAAGCCACAGGGAATCCAGTAACAAATCTATCTGACAGTGGTGCAGATAACCATGAACAAACCTCAACAAAATCTAAGAAAAGCCAGAAAAGGGGTAAGGATGCATCATCACAGACATCGGATTCAAAGACAGGTTCTAGAAAAGAGGATAACATTGGTCCCTCAGAAGAATGGATCATGCAGAAAATTACTACATTGGTTCCTGATTTTGAAGAACAAGGTATAGATGATCCTGAAACAATTCTTAAGCCTTTGGCTAACCAATTAAGGCCTACAATAATCAGTTCTTGGATGGAGAAAAAGAAGGCGTTGCTTACAAACAATGCAGAAAGAATGAAACGTTTGCTTGATAATTTGCAGAAGAAACTTGATGAGTCATTCTTAAACATGCAGCTGTATGAAAAAGCCTTGGAATTGTTTGAAGATGATCAATCAACTTCTGTTGTTTTGCATAGGCATTTACTAAGGACAGTAGCAGCTCCTATGGTGGATATGCTTCTCCATAACTTGGATGTGCACAACAAATTAAAGAATGGAGTGGATGTGCAGGAAGCTCCAGATTCTGAATCTGTTTCACTTAGTCCTGGAGAGAGAACTGCAATTTCTAAGAGTTTTCCAGGAGCTCTTGCAAACAAGGCTCTTGCTGTTATAGAAGCATTGGAAGGAAAGAGCGTTGACATATTCATGGGTGCTTTTAGAATGGTAACAGAAGAGAGTGGGTTGCCTTTGAAAAAGCTTGACAAGAAACTAGAAAGAACACTTTTACATTCATATCGAAAGGAATTGACATCTGAAGTTTCTGCTGAGACTGACCCTGTTTCACTTTTGCCAAAAGTTGTGTCTTTACTTTATATCCAGGTTTACCATAAAGCCCTTCAAGCTCCTGGAAGGGCCATTTCTGTTGCTATTTCCCATTTAAAGGACAAGCTAGATGAGTCAGCAAACAAAATTTTAATTGATTATCAAACTGCCACAGTGACTCTTTTGGCACTATTAGCAGCTGCACCTAGTGATGAAGAGGGTTGTGCATCTGATAGGATTTTGAGTAAAAGGGAGCTACTGGAGAGCCAAATGGTGGACCTCAAACGCTTGGTTTTGAGCACCTCACAATCTTCATAA 2445 0.427 MDDELLELQRQFEFAQQAKSSIRLSERNVVELVQKLQHLQIIDFELLYTVSGKEYITLDQLRNEMVAEVKKLGRVSLIDLADATGVDLFYVEKQAQNVVTDHRELMLTQGEIMSESYWDSIAEEINERLQECSQIALTELAAQLNVGLDLVASMLEPRLGTMVKGRLEGGQLYTPAYVARVSAMVRGAARGITVPTNLTVLWSSLQQLLQEMDGTSGLAVEGSFFQSLFNGLVKEGEILGSLRAGVHWTPAVFAVAQKEFVDSFFSQNSFISYEALHKLGIPQPIQFLQSRYPEGKPLVTTFVHPSMIEMLDAATEDALERGSWSDSLSLLPSSFTPQDASKVLSLCQSVQNGLKSNKAHIFGDFYVLSSSFIKDICDRMVKELETLGISGSFGTMMMPGDLQVANEAKKGNDSSRLNECNEMVSDVGANKHADKGTKKKKGKATGNPVTNLSDSGADNHEQTSTKSKKSQKRGKDASSQTSDSKTGSRKEDNIGPSEEWIMQKITTLVPDFEEQGIDDPETILKPLANQLRPTIISSWMEKKKALLTNNAERMKRLLDNLQKKLDESFLNMQLYEKALELFEDDQSTSVVLHRHLLRTVAAPMVDMLLHNLDVHNKLKNGVDVQEAPDSESVSLSPGERTAISKSFPGALANKALAVIEALEGKSVDIFMGAFRMVTEESGLPLKKLDKKLERTLLHSYRKELTSEVSAETDPVSLLPKVVSLLYIQVYHKALQAPGRAISVAISHLKDKLDESANKILIDYQTATVTLLALLAAAPSDEEGCASDRILSKRELLESQMVDLKRLVLSTSQSS* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1427 814 MobiDBLite consensus disorder prediction 444 460 - -
Apr3g1427 814 Pfam E3 UFM1-protein ligase 1 4 288 IPR018611 GO:0061666|GO:0071569
Apr3g1427 814 PANTHER E3 UFM1-PROTEIN LIGASE 1 1 812 IPR018611 GO:0061666|GO:0071569
Apr3g1427 814 Coils Coil 544 578 - -
Apr3g1427 814 MobiDBLite consensus disorder prediction 461 497 - -
Apr3g1427 814 MobiDBLite consensus disorder prediction 424 499 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1427 1 777 EF-hand Containing Proteins AT3G46220 62.675 0.0 962
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1427 K22755 - gmx:100808087 1348.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1427 3 28867899 28875472 Apr3g1427 3 28867899 28875472 ECH