Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1426 ATGTCAGGGTTACTTAATTCTTCTCTGAATGGATCTGCTTCGAATCTTCCAGATGGTGCTGGACGGTCTTTTGCCTCATCATTTTCTGGTCAGTCTGGTGCAGCCTCCCCAATTTTTCATCACACTGGAGCTATTCAAGGATTGCACAATATTCATGGGAGCTTTAATGTTCCCAATATGCCCGGTACGCTCACATCAAGAAACTCAACTATAAATAGTGTTCCATCAGGGGGTGTTCAACAACCCACTGGAAGCCTTTCTAGTGGAAGATTTGCATCCAACAATATCCCCGTTGCTTTGTCTCAGCTATCTCATGGAAGCTCCCATGGACATTCAGGAGTCACCAATAGAGGAGGTATAAGTGTTGTGGGAAACCCTGGATTTAGTAGTAGCACAAATGGAGTTGGTGGTTCTATTCCTGGGATTCTTCCTACATCTGCTGCAGTTGGTAACCGAAATGCTGTTCCAGGATTGGGAGTATCCCCAATTTTGGGAAATGCAGGTGGTCGAATCACAAGTTCTGTGGGAAATATGGTTGGAGGGGGGAATATTGGAAGGACTGGTGGAGGATTGTCTGTGCCTGGTCTTGCTTCTCGTCTGAATTTGGGTGCAAACAGTGGATCTGCTGGTTTGGGTATGCAAGGACAGAATCGATTGATGAGTGGTGTACTTCCACAAGGATCTCCACAGGTAATTTCAATGCTAGGAAATTCTTATCCTAGTGCTGGAGGTCCACTTTCTCAAAGCCATGTTCAAGCAGTAAGTAACTTGAACTCTATGGGGATGTTGAATGATGTAAATTCCAACGACAACTCACCTTTTGACCTCAATGACTTCCCTCAACTGACAAGTCGACCTAGTTCTGCTGGAGGGCCTCAAGGACAATTAGGATCTTTACGGAAACAGGGTCTTAGTCCCATTGTTCAACAAAACCAAGAGTTCAGCATTCAAAATGAAGATTTCCCAGCTTTACCAGGATTCAAAGGTGGTAATGCAGATTATGCTATGGATATGCACCAGAAAGAACAACTTCATGACAATGCTGTGCCAATGATGCAATCTCAGCATTTCTCTATGGGGAGGTCAGCTGGTTTTAGCTTAGGGGGTACATATTCATCACATCGCGCACAACAGCAGCAGCATGCACCTTCAGTCAGTAGTGGCAATGTTTCTTTTTCATCTGTTAACAACCAGGATCTTCTCCATTTACATGGATCAGATATTTTTCCATCTTCACATTCAACCTATCATTCACAGACCAGTGGACCTCCTGGAATTGGATTAAGACCTTTAAATTCTCCAAATACAGTTTCTGGTATGGGTTCATACGACCAGCTTATCCAGCAATATCAACAGCACCAGAACCAGTCCCAGTTTCGCCTTCAAATGTCAGCTGTAAATCAATCTTTTAGGGATCAGGGCATGAAGTCTATTCAAACTGCGCAATCTACACCTGATCCATTTGGTTTGCTTGGCTTGTTAAGTGTGATCAGGATGAGTGATCCTGACCTGACATCTCTTGCTCTTGGAATTGATCTTACTACATTAGGGTTAAATTTGAATTCATCAGAAAATCTTCACAAGACCTTTGGGTCCCCGTGGTCAGAAGAACCAGCTAAGGGTGATCCAGAATTTAATGTGCCGCAATGTTATTATGCCAAACAGCCACCTGCTCTACATCAAGGTTACTTTTCAAAGTTTTCAGTGGAAACACTGTTTTACATATTTTACAGCATGCCCAAAGATGAAGCACAATTATACGCCGCAAATGAGCTTTACAACAGAGGTTGGTTTTATCACAAAGAACATCGTATGTGGTATATAAGAGTTCCCAACTTAGAGCCACTGGTTAAAACAAACACATACGAGAGAGGATCTTATCACTCTTTCGACCCAAACCTTTTTGAAATCGTTCACAAGGATAATATTGTTCTTCATTACGAAATGTTGGAAAAGAGACCGCATCTGCCTCAACATTGA 1980 0.4278 MSGLLNSSLNGSASNLPDGAGRSFASSFSGQSGAASPIFHHTGAIQGLHNIHGSFNVPNMPGTLTSRNSTINSVPSGGVQQPTGSLSSGRFASNNIPVALSQLSHGSSHGHSGVTNRGGISVVGNPGFSSSTNGVGGSIPGILPTSAAVGNRNAVPGLGVSPILGNAGGRITSSVGNMVGGGNIGRTGGGLSVPGLASRLNLGANSGSAGLGMQGQNRLMSGVLPQGSPQVISMLGNSYPSAGGPLSQSHVQAVSNLNSMGMLNDVNSNDNSPFDLNDFPQLTSRPSSAGGPQGQLGSLRKQGLSPIVQQNQEFSIQNEDFPALPGFKGGNADYAMDMHQKEQLHDNAVPMMQSQHFSMGRSAGFSLGGTYSSHRAQQQQHAPSVSSGNVSFSSVNNQDLLHLHGSDIFPSSHSTYHSQTSGPPGIGLRPLNSPNTVSGMGSYDQLIQQYQQHQNQSQFRLQMSAVNQSFRDQGMKSIQTAQSTPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSEEPAKGDPEFNVPQCYYAKQPPALHQGYFSKFSVETLFYIFYSMPKDEAQLYAANELYNRGWFYHKEHRMWYIRVPNLEPLVKTNTYERGSYHSFDPNLFEIVHKDNIVLHYEMLEKRPHLPQH* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1426 659 PANTHER NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED 2 659 - -
Apr3g1426 659 MobiDBLite consensus disorder prediction 412 440 - -
Apr3g1426 659 Gene3D - 478 659 IPR038635 -
Apr3g1426 659 MobiDBLite consensus disorder prediction 368 391 - -
Apr3g1426 659 MobiDBLite consensus disorder prediction 262 299 - -
Apr3g1426 659 Pfam NOT2 / NOT3 / NOT5 family 528 650 IPR007282 GO:0006355
Apr3g1426 659 MobiDBLite consensus disorder prediction 59 87 - -
Apr3g1426 659 PANTHER CCR4 NOT-RELATED 2 659 IPR040168 GO:0030015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1426 Apr-Chr3 28859615 28867161 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1426 K12605 - gmx:100807026 1195.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1426 3 28859615 28867161 Apr3g1426 3 28859615 28867161 ECH