Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1405 ATGGCGGCGTCGCGAATCATAGCCCATCCTCATCCCCATTCACTCCGTCAATCTCCGCCGTCAGAACCCGTCATTTCCCTCAACCTCTTACCCCTCCCTAAACGGTACCGTAACCTCACCGTTCGCGCTCACAATCACGATCTCACCAGCAAACCCCACTCCGTTGAACTTCGAACCACCCCCGACGACGTCGTTTCACGAGATCCACTCGCTCTTCCGCGGCCTTTATCCTCCACTCAGTTCTCTGGTTCAGTTTCCGATGGTTCTCGTCTTCGTGTTGCATATCAGGGGGTTCGTGGTGCTTACAGTGAGTCAGCTGCACAGAAGGCATACCCAAATTGTGAAGCTGTTCCTTGTGAACAATTTGATACTGCTTTTGAAGCAGTTGAAAGGTGGCTTGTGGACAGAGCAGTTTTGCCAATTGAGAATTCTTTAGGAGGGAGCATCCACAGAAATTATGACCTTTTACTCCGGCACAGCTTACATATAGTAGGAGAAGTAAAATATGCAGTCCATCATTGCTTGATGTCTAACCACGGTGTTAAACTTGAGGATTTGAAGCGGGTTCTTAGTCATCCACAGGCTCTTGCACAATGTGAAAACACACTGACGAGGTTGGGATTGGTCAGAGAAGCAGTTGATGATACAGCCGGTGCTGCAAAGCATGTTGCCTTCCACCAACTACTAGATGCAGGAGCAGTTGCTAGTTCTGCTGCTGCAACGATCTATGGCTTGAATATACTTGCTGAAGATATTCAGGATGATAGCGATAATGTTACTAGATTTTTAATGTTAGCACGAGAACCTATAATTCCAGGCACAGATAGACCATTTAAGACAAGCATAGTATTTTCTTTAGAAGAGGGTCCTGGGATACTCTTCAAGGCCCTTGCTGTTTTTGCTTTGCGTCATATCAACCTTACAAAGATTGAGAGTCGTCCTTTGCGGAATCAACCACTACGAGCATCAGATGATAGCAACAATGGGTGTTCCAAGTACTTTGATTATCTTTTCTATGTTGATTTTGAAGCGTCAATGGCTGATCAGAGTGCACAAAATGCCCTAAGGCATCTAAAGGAGTTTGCTACATTCTTGCGAGTGCTTGGGAGCTATCCTGTGGACACTAGCATGGCGTAA 1137 0.4626 MAASRIIAHPHPHSLRQSPPSEPVISLNLLPLPKRYRNLTVRAHNHDLTSKPHSVELRTTPDDVVSRDPLALPRPLSSTQFSGSVSDGSRLRVAYQGVRGAYSESAAQKAYPNCEAVPCEQFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHSLHIVGEVKYAVHHCLMSNHGVKLEDLKRVLSHPQALAQCENTLTRLGLVREAVDDTAGAAKHVAFHQLLDAGAVASSAAATIYGLNILAEDIQDDSDNVTRFLMLAREPIIPGTDRPFKTSIVFSLEEGPGILFKALAVFALRHINLTKIESRPLRNQPLRASDDSNNGCSKYFDYLFYVDFEASMADQSAQNALRHLKEFATFLRVLGSYPVDTSMA* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1405 378 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 56 377 - -
Apr3g1405 378 CDD ACT_CM-PDT 279 372 - -
Apr3g1405 378 Gene3D - 274 375 - -
Apr3g1405 378 Pfam Prephenate dehydratase 93 269 IPR001086 GO:0004664|GO:0009094
Apr3g1405 378 ProSiteProfiles Prephenate dehydratase domain profile. 92 267 IPR001086 GO:0004664|GO:0009094
Apr3g1405 378 PANTHER AROGENATE DEHYDRATASE 56 377 - -
Apr3g1405 378 CDD PBP2_Ct-PDT_like 92 269 - -
Apr3g1405 378 Gene3D - 87 175 - -
Apr3g1405 378 ProSiteProfiles ACT domain profile. 281 372 IPR002912 -
Apr3g1405 378 Gene3D - 176 255 - -
Apr3g1405 378 MobiDBLite consensus disorder prediction 1 21 - -
Apr3g1405 378 SUPERFAMILY ACT-like 262 373 IPR045865 -
Apr3g1405 378 ProSitePatterns Prephenate dehydratase signature 1. 243 265 IPR018528 GO:0004664|GO:0009094
Apr3g1405 378 SUPERFAMILY Periplasmic binding protein-like II 92 273 - -
Apr3g1405 378 ProSitePatterns Prephenate dehydratase signature 2. 307 314 IPR018528 GO:0004664|GO:0009094
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1405 Apr-Chr3 28502275 28506087 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1405 K05359 - gmx:100787387 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1405 3 28502275 28506087 Apr3g1405 3 28502275 28506087 ECH