Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1397 ATGTCGGCACCGCAGCGATTTCTAAGCACTCTCTCCAACTCTCTCCCTCCTTCTACCTCTCTCTCTGCCTTCAAATCTAGAACTTTCCTTTTCCTTCCCTTCAACCACTGTTACACAACCCTACTTCACTCTCTCTCATCAATGCCTCGCAATCAGCAAAATGGCGGCGACGGAGAGCGAAGATGGAAAGCGAAAGCGAAAACCGAGGGGCAGTTATCAGCTGTGGTTGATGCGGCTACAACTGCTGCTGAAACTGTTACTAATAAACTTTCTGGAATGCATATTGGTCAAAACAGCGCGAAAATCGGGGTTCATGGTTCAGCGGCGATTTGGAAACCTAAATCTTATGGAACTGCGAGTGGAGGGACTGTAACTGAAGTTGAAAACGTACCGGTCGGAGAAGGAGTTGGTGCAAATGTCGCTTCAACTCAAAACGCTAGTGGTATTGGTACTGGTTTGAGTAAGATATTTCGCGGTAATAAGATAGAGAATTTCACTGTAGATAACTCCACGTACTCACGTGCACAAATCAGAGCAACTTTCTACCCCAAATTCGAAAATGAAAAGTCCGATCAAGAGGCAAACCATATGTGCATATCTATGGAACTAGTAACTGCTGTTCTTGGAGACCACGGACAGCGTCCCCAAGAAGATTATGTGGTAGTAACGGCAGTTACTGAACTGGGCAATGGAAAACCAAAGTTCTATTCAACTCCTGAGATAATTGCTTTCTGCAGAAGATGGCGCCTTCCAACAAATCATGTGTGGTTGTTTTCAACAAGAAAATCAGCTACTTCTTTCTTTGCTGCCTATGATGCCTTATGTGAGGAGGGTACTGCAACATCTGTATCCAAGGCTCTTGATGAAATTGCAGACATTTCTGTACCAGGTTCAAAAGACCATGTAAAAGCCCAAGGTGAAATTTTAGAGGGTCTTGTGGCTCGTCTTGTGAGTCTTGAGAGTTCAAACCATATCGAGAAAATTTTGAAAGAATTTCCTCCTCCACTTGCTAATGGAGTGGCCCTTGATTTTGGACCAAGTTTAAGGGAAATTTGTGGAGCAAATAGAGATAATGAAAAGCAGCAAATAAAAGCACTTCTAGAGAGTGTTGGTGGTTCTTTTTGTCCTGACTACTCAGATTGGTTTGGGACTGGTGCTGCTGATTTTCATTCAAGAAATGCAGACAGATCTGTCCTTTCAAAGTTCTTACAAGCCCATCCTGCAGACTATTCAACTAAAAAGTTGCAGGAAATTGTTCGGTTGATAAGGGAAAAACGCTACCCTGCTGCATTCAAATGTTATCATAACTTCCACAAGGTTGAAGCCATGTCGAGTGACAATCTTTTCTATAAAATGGTCATTCATGTACACAGTGATTCAACTTTCCGGCGATACCAAAGAGATATGAGGCATAAACCAGGATTATGGCCACTATATCGAGGATTTTTTGTTGATATCAATTTATTCCATGCAAACAAGGAGAAAGCCACTGAAATTTCTAAAAACAGTATTAATGAAAGTAGTAATACTGGCTCTGAGGAAGATGACTTTGCTGATGAAGATGCAAATTTAATGGTCAAATTGAAATTTCTTACATACAAGTTGCGAACCTTTCTCATTCGAAATGGCTTGTCAATTCTGTTCAAAGAAGGCCCAGGTGCTTACAAGGCGTATTACCTCAGACAAATGAAAATTTGGGGAACTTCTTCAGCAAAGCAGAGAGAACTTAGTAAGATGCTTGATGAATGGGCTGTGTATATCAGAAGGAAGTGTGGAAATAAGCAACTGTCTTCATCAACATATCTTAGTGAAGCTGAGCCTTTTCTTGAACAATTTGCAAGACGTAGTCCACAGAACCAAATTCTGGTAGGTTCGGCAGGTAATTTAGTTAGGACAGAAGATTTCCTGGCCATTGTTGAGGGAGGCCAGGATGAAGAAGGTGATCTTGTGGCAGAGCGTGAGGTTGCACCCCCACAGACTAATATCCCTGTCAAGGACACAGTTTCAAAATATGAAGGGTTGATTGTTTTCTTTCCTGGAATACCTGGTTGTGCTAAGTCTGCCCTTTGCAAAGAATTGCTAAATGCCCAAGGAGGACTTGGAGATGATCGGCCAGTTCATAGTCTCATGGGTGATCTGATTAAAGGAAAGTATTGGCAGAAAGTGGCTGAAGATCGCAGAAAGAAACCAAATTCTATAATGCTTGCTGACAAGAATGCTCCAAATGAAGAAGTTTGGAAACTGATAGAAGATATGTGTCACAAAACTAGGGCATCTGCTGTCCCAGTTGTGCCTGAATCTGAAGGAACTGATTCAAATCCATTTTCTCTTGAGGCATTAGCTGTTTTCATGTTTCGTGTGCTTCAGCGTGTCAACCATCCGGGAAATCTTGACAAAGCATCTCCAAATGCTGGCTATGTGTTGCTAATGTTTTATCACCTTTATGATGGCAGGAGCCGTAAGGAGTTTGAGGGTGAATTAATTGAGCGTTTTGGATCACTTGTCAAGATGCCACTATTGAAATCTGATAGAAATCCCCTTCCTGAGGCAGTGCAGTCCATTTTGGAGGAAGGAATTGATCTATATAAACTTCACACTAAAAGACATGGAAGATTAGAGTCTACAAAAGGATCCTACGCAAAGGAGTGGATAAAATGGGAGAAACAATTACGGGATACTCTTTGTGGAAATGCTGAGTATTTTAATTCAATTCAGGTTCCATTTGAGTTTGCTGTCAAGCAAGTGTCGGAACAGTTGAGAAACATTGCTAAGGGAGATTACACACCACCAGATACTGAAAAGAGGAAACTTGGTACCATTGTTTATGCTGCTCTTAGTATGCCAGTTACGGAAATTCAAGGTGTTCTTAATAAACTGGCTCAGAATAATCCCAAGATTGACACATTCCTTAAAGACAAACATTTAGAGAATCTTAATCGAGCTCATTTGACTCTTGCGCACAAGAGAAGTCATGGCATCAAAGCAGTAGCTGATTATGGTATCTTTCTGCATAAAAAGGTGCCAGTGGAGCTGACAGCACTGCTCTTCTCAGATAAAATGGCTGCATTTGAAGCTTGTCCTGGATCAGTGGAAGGTGAGAAGATAGTTTCAAAAAATGCGTGGCCTCATATTACCATATGGACTAGTGAAGGGGTTGCAGCCAAGGAGGCCAATGTGTTACCACAGTTGTTTGCAGAGGGTAAAGCAGATCGTATAGACTTCAATCCTCCCATCAATATATCTGGCACAGTTGACTTCTATTGA 3264 0.417 MSAPQRFLSTLSNSLPPSTSLSAFKSRTFLFLPFNHCYTTLLHSLSSMPRNQQNGGDGERRWKAKAKTEGQLSAVVDAATTAAETVTNKLSGMHIGQNSAKIGVHGSAAIWKPKSYGTASGGTVTEVENVPVGEGVGANVASTQNASGIGTGLSKIFRGNKIENFTVDNSTYSRAQIRATFYPKFENEKSDQEANHMCISMELVTAVLGDHGQRPQEDYVVVTAVTELGNGKPKFYSTPEIIAFCRRWRLPTNHVWLFSTRKSATSFFAAYDALCEEGTATSVSKALDEIADISVPGSKDHVKAQGEILEGLVARLVSLESSNHIEKILKEFPPPLANGVALDFGPSLREICGANRDNEKQQIKALLESVGGSFCPDYSDWFGTGAADFHSRNADRSVLSKFLQAHPADYSTKKLQEIVRLIREKRYPAAFKCYHNFHKVEAMSSDNLFYKMVIHVHSDSTFRRYQRDMRHKPGLWPLYRGFFVDINLFHANKEKATEISKNSINESSNTGSEEDDFADEDANLMVKLKFLTYKLRTFLIRNGLSILFKEGPGAYKAYYLRQMKIWGTSSAKQRELSKMLDEWAVYIRRKCGNKQLSSSTYLSEAEPFLEQFARRSPQNQILVGSAGNLVRTEDFLAIVEGGQDEEGDLVAEREVAPPQTNIPVKDTVSKYEGLIVFFPGIPGCAKSALCKELLNAQGGLGDDRPVHSLMGDLIKGKYWQKVAEDRRKKPNSIMLADKNAPNEEVWKLIEDMCHKTRASAVPVVPESEGTDSNPFSLEALAVFMFRVLQRVNHPGNLDKASPNAGYVLLMFYHLYDGRSRKEFEGELIERFGSLVKMPLLKSDRNPLPEAVQSILEEGIDLYKLHTKRHGRLESTKGSYAKEWIKWEKQLRDTLCGNAEYFNSIQVPFEFAVKQVSEQLRNIAKGDYTPPDTEKRKLGTIVYAALSMPVTEIQGVLNKLAQNNPKIDTFLKDKHLENLNRAHLTLAHKRSHGIKAVADYGIFLHKKVPVELTALLFSDKMAAFEACPGSVEGEKIVSKNAWPHITIWTSEGVAAKEANVLPQLFAEGKADRIDFNPPINISGTVDFY* 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1397 1087 PANTHER TRNA LIGASE 1 106 194 IPR038837 GO:0003972|GO:0006388
Apr3g1397 1087 PANTHER TRNA LIGASE 1 193 1071 IPR038837 GO:0003972|GO:0006388
Apr3g1397 1087 PANTHER TRNA LIGASE 1 193 1071 - -
Apr3g1397 1087 PANTHER TRNA LIGASE 1 106 194 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1397 - - gmx:100815563 1644.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1397 3 28405427 28421046 Apr3g1397 3 28405427 28421046 ECH