Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1394 ATGGCCGAAACAACCTCTTCCGACAACAATCATATTCCAATCGAAATCGTGAGCGATCATGAAATGGCTCTCATTGAAGCTGCATTTGCTTTAGCTTCTCGTTCTTTCTCTGCCATTCGTTCATCTCCATCCACACTCACACCACCTCCTTCTCCCCACTCTCACGCTTCTGCGTTCTCCGTCAACTCAATCACCCTTCTATCCAAAAGAAGGTTGTCCAATGACATTGATATTGAAGACTCACACTCACTCACCCACAAGAAAAAAACCACTCTTCCCGATTCCCTTCTTCACCGTTTCAGAAGGAAAAGGGGCTTGTCCGTCACTGATCTTACCTCTACGGAATGGTGCCCAAAACAAATGGAATTTTCTCTTCTTCTTGGAGGGCGAAAGGTCAATCAAGTAATGAGAGCTGGCATTGCTCGCCATGCAAAGCTTGAAGAAGAGGTTATAAAACGGGTGGAAGTGAAGGTCAAATCACAAGAAGATTATTGGGCCCTGAAGTTTCTTAATTTTATAAGTGGTGTAAATCAATTATTATTTGAAGGATTAACTCGTGAACTTCCAGTAATAGGCTTTGCAGAAGATACATGGATGGTGGGAGTAATTGATGAGATTCGGATGCCATTAATAGAAAACCATCATAATCCAATACTAATTGACACAAAGACTCGTGCTCGAGATACACTTCCAGCCGAACCACAACGAAGAAATGGAAGGCTTCAATTGATGTGCTACAAGTATTTGTGGGACAATTTAGTTACTGATAATTTCCCTTCTAAAAAGTTTTTCACTTATTTTGGCCTAAACCCTCAGCATAATCTATGTGAAGATCTGAAAATGATAGGTGCTGACTCTGGATTTTCCGCTTCGACCTTGGATGATGTGGTGAGATACTACAGAAATACGTGCAGTATGCTGGCCCCTGCTCACGATCAGCTTTTATTGAGATATGAGTATCAGAAAGATCATTCGCTGCTTGGTGAAGATAAATTTGCATATGATTCTGACTGGCTAAAGAATCAAATTCGTTGTTGTCTTGAGTTTTGGCATGGAGAACGAGAAGCCACTTATACTCCTGAGGAGGAGCGATGGAAATGTCGATTCTGTCAATTTGGCACTGTCTGTCCTGCTTACACTGATAGGAAAGGAATGGTGGCCAGTACAAGCAATGATTCAAATATCAAAGAAGGCTAG 1197 0.4177 MAETTSSDNNHIPIEIVSDHEMALIEAAFALASRSFSAIRSSPSTLTPPPSPHSHASAFSVNSITLLSKRRLSNDIDIEDSHSLTHKKKTTLPDSLLHRFRRKRGLSVTDLTSTEWCPKQMEFSLLLGGRKVNQVMRAGIARHAKLEEEVIKRVEVKVKSQEDYWALKFLNFISGVNQLLFEGLTRELPVIGFAEDTWMVGVIDEIRMPLIENHHNPILIDTKTRARDTLPAEPQRRNGRLQLMCYKYLWDNLVTDNFPSKKFFTYFGLNPQHNLCEDLKMIGADSGFSASTLDDVVRYYRNTCSMLAPAHDQLLLRYEYQKDHSLLGEDKFAYDSDWLKNQIRCCLEFWHGEREATYTPEEERWKCRFCQFGTVCPAYTDRKGMVASTSNDSNIKEG* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1394 398 PANTHER EXONUCLEASE V 3 384 IPR019190 GO:0045145
Apr3g1394 398 Gene3D - 61 378 IPR011604 -
Apr3g1394 398 Pfam Exonuclease V - a 5' deoxyribonuclease 95 208 IPR019190 GO:0045145
Apr3g1394 398 Pfam Exonuclease V - a 5' deoxyribonuclease 215 278 IPR019190 GO:0045145
Apr3g1394 398 Pfam Exonuclease V - a 5' deoxyribonuclease 308 376 IPR019190 GO:0045145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1394 Apr-Chr3 28386460 28390634 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1394 K17815 - gmx:100792136 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1394 3 28386460 28390634 Apr3g1394 3 28386460 28390634 ECH