Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1382 ATGAAGAAGCAATCACTCTTGTGCTTCTCACTTGCATTGCTAGTTTCCCTCCTGTGTTCCACCGTAACTCTAGCACAATTAGCACCAGTTGGTGCACCAGTACAACCAGCAAAACCTACACCAACCCCACCAGCAGCATCTCCAAAACCATTGGTACCCTCATTACCACAATCACCAAGCCCAAGTGATGCCACTCCGGACACTCCAGCAGTTGACATCGTTGGAATCTTGAGAAAAGCAAAGTCATTCAACATCATAATCCGCCTCATGAAAACCACCCAATTGATCAACCAACTCAATGCACAGCTTCTCACTACTAAATCGGGTGGCTTAACCATTCTTGCACCTGATGACAGTGCCTTCTCTGAACTCAAAGCAGGCTTCCTCAACACTCTCTCTGATGGACAAAAGCTTGAACTCTTGCAGTTCCACGTTCTTCCAGACTATGTCTCCAGCTCTAACTTTGATACTCTCACCAACCCAGTGAGAACACTTGCAGGAGCTAAACCTGGAAAGGTGGAACTGAATGTGGTGAGCTACGGAGGGAGTGTGAACATCTCAACTGGTGAGGTAAACACCACCATCAATGGCATTATATATACTGATAAACATCTTGCTATTTATAAAGTGGGTAAGGTGCTTCTTCCTATGGACTTCTTTGCTGTTGCTAAGGCACCTGCAAAGGCACCTTCTTTGGCTCCAGAACCTTCAAGTGATGCAGCAAAGGCACCTAAGCCTGATAAGGATGCTTCATCATCTTCAGATTCTTCACATGTTAATCCCACTGAAGTGAACTCTGGCACCGTGATGATCAGTGTGTGGGGAAAGTGGATGTCACTTGCTCTTGGAGCAGTTCTCATGACTGTATTGTGGTCATAA 879 0.4585 MKKQSLLCFSLALLVSLLCSTVTLAQLAPVGAPVQPAKPTPTPPAASPKPLVPSLPQSPSPSDATPDTPAVDIVGILRKAKSFNIIIRLMKTTQLINQLNAQLLTTKSGGLTILAPDDSAFSELKAGFLNTLSDGQKLELLQFHVLPDYVSSSNFDTLTNPVRTLAGAKPGKVELNVVSYGGSVNISTGEVNTTINGIIYTDKHLAIYKVGKVLLPMDFFAVAKAPAKAPSLAPEPSSDAAKAPKPDKDASSSSDSSHVNPTEVNSGTVMISVWGKWMSLALGAVLMTVLWS* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1382 292 Pfam Fasciclin domain 82 216 IPR000782 -
Apr3g1382 292 MobiDBLite consensus disorder prediction 34 68 - -
Apr3g1382 292 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 289 - -
Apr3g1382 292 MobiDBLite consensus disorder prediction 230 261 - -
Apr3g1382 292 MobiDBLite consensus disorder prediction 34 63 - -
Apr3g1382 292 ProSiteProfiles FAS1/BIgH3 domain profile. 70 205 IPR000782 -
Apr3g1382 292 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 289 IPR045003 -
Apr3g1382 292 SMART fasc_3 112 217 IPR000782 -
Apr3g1382 292 Gene3D FAS1 domain 55 216 IPR036378 -
Apr3g1382 292 SUPERFAMILY FAS1 domain 63 217 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1382 Apr-Chr3 28291492 28292609 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1382 - - gmx:100795331 367.081