Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1380 ATGTTGATGAAGCAATCTCTCTTGTGCTTCTTACTTGCACTGATAGTTCCCTTCATGTGTTCCACCACAACAGTAGCACAATTAGCACCAGTTGGTGCACCTGTACAACCAGCAAAACCTACTCCAACCCCACCAGCAGCATCTCCAAAACCATTGGTACCCTCATTACCACAATCACCAAGTCCAAGTGATGCCACTTCCGACACTCCAGCAGTTGACATTGTTGGAATCTTGAGAAAAGCAAAGTCATTCAACATCCTAATCCGCCTCATGAAAACCACCCAATTGATCAACCAACTCAATGCACAGCTTCTCACTACTAAATCAGGTGGCTTAACCATTCTTGCACCTGATGACAGTGCCTTCTCTGAACTCAAAGCAGGCTTCCTCAACACTCTCTCTGATGGACAAAAGCTTGAACTCTTGCAGTTCCACGTTCTTCCAGACTATGTCTCCAGCTCTAACTTTGATACTCTCACCAACCCTGTGAAAACACTTGCAGGTGCTAAACCTGGAAAGGTGGAACTGAATGTGGTGAGCTACGGAGGGAGTGTGAACATCTCAACTGGTGAGGTTAACACCACCATCAATGGCATTATATATACTGATAAGCATCTTGCTATCTATAAAGTGGGTAAGGTGCTTCTTCCTATGGACTTCTTTGCTGTTGCTAAGGCACCTGCAAAGGCACCTTCTTTGGCTCCAGAACCATCTGCAAATGCGCCAAAAGCTGATAAGGGGAAGCCATTATCCCCAGATTCTTCAGAGTCATCTCAGATTAATTCCACAAACGAGAACTCTGGCACTATGAAAATCACTGTTCATGGAAAGTGGGTGTCCCTTGTTCTTGGAGCTTTATGGTGA 864 0.4514 MLMKQSLLCFLLALIVPFMCSTTTVAQLAPVGAPVQPAKPTPTPPAASPKPLVPSLPQSPSPSDATSDTPAVDIVGILRKAKSFNILIRLMKTTQLINQLNAQLLTTKSGGLTILAPDDSAFSELKAGFLNTLSDGQKLELLQFHVLPDYVSSSNFDTLTNPVKTLAGAKPGKVELNVVSYGGSVNISTGEVNTTINGIIYTDKHLAIYKVGKVLLPMDFFAVAKAPAKAPSLAPEPSANAPKADKGKPLSPDSSESSQINSTNENSGTMKITVHGKWVSLVLGALW* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1380 287 Pfam Fasciclin domain 83 217 IPR000782 -
Apr3g1380 287 MobiDBLite consensus disorder prediction 35 58 - -
Apr3g1380 287 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 280 IPR045003 -
Apr3g1380 287 ProSiteProfiles FAS1/BIgH3 domain profile. 71 206 IPR000782 -
Apr3g1380 287 MobiDBLite consensus disorder prediction 251 268 - -
Apr3g1380 287 MobiDBLite consensus disorder prediction 232 268 - -
Apr3g1380 287 SMART fasc_3 113 218 IPR000782 -
Apr3g1380 287 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 280 - -
Apr3g1380 287 SUPERFAMILY FAS1 domain 64 218 IPR036378 -
Apr3g1380 287 Gene3D FAS1 domain 55 217 IPR036378 -
Apr3g1380 287 MobiDBLite consensus disorder prediction 35 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1380 Apr-Chr3 28275289 28280756 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1380 - - gmx:100790242 411.379