Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1379 ATGACGATGAAGAAGCAATCTCTCTTGTGCTTCTCACTTGCACTGATAGTTTCCTTCATGTGTTCCACCATCACAGTAGCACAATTAGCACCAGTTGGTGCACCAGTACAACCAGCAAAACCTACCCCAACCCCACCAGCAGCATCTCCAAAACCATTGGTACCTTCATTACCACAATCACCAAGTCCAAGTGATGCCACTCCTGACACTCCAGCAGTTGACATTGTTGGAATCTTGAGAAAAGCAAAGTCTTTCAACATCCTAATCCGCCTCATGAAAACCACCCAATTGATCAACCAACTCAATGCACAGCTTCTCACTACTAAATCAGGTGGCTTAACCATTCTTGCACCTGATGACAGTGCCTTCTCTGAACTCAAAGCAGGCTTCCTCAACACTCTCTCTGATGGACAAAAGCTTGAACTCTTGCAGTTCCACGTTCTTCCAGACTATGTCTCTAGCTCTAACTTTGATACTCTCACCAACCCTGTGAAAACACTTGCAGGGGCTAAACCTGGAAAGGTGGAACTGAATGTGGTGAGTTACGGAGGGAGTGTGAACATCTCAACTGGTGAGGTTAACACCACCATCAATGGCATTGTGTATACCGATAAGCATCTTGCTATTTATAAAGTGGGTAAGGTGCTTCTTCCTATGGACTTCTTTACTGTTGCTAAGGCACCTGCAAAGGCACCTTCTTTGGCTCCAGAACCTTCAAGTGATGCAGCAAAGGCACCTAAGCCTGATAAGGATGCTTCATCATCTTCAGATTCGTCACAAGTTAATCCCACTGCGGTGAACTCTGGCATGAAGATCGGTGTGTGTGGAAAGTGGGTGTCACTTGGACTTGCATTGGTGGCAACAATGATGCAAGGCTAA 879 0.4585 MTMKKQSLLCFSLALIVSFMCSTITVAQLAPVGAPVQPAKPTPTPPAASPKPLVPSLPQSPSPSDATPDTPAVDIVGILRKAKSFNILIRLMKTTQLINQLNAQLLTTKSGGLTILAPDDSAFSELKAGFLNTLSDGQKLELLQFHVLPDYVSSSNFDTLTNPVKTLAGAKPGKVELNVVSYGGSVNISTGEVNTTINGIVYTDKHLAIYKVGKVLLPMDFFTVAKAPAKAPSLAPEPSSDAAKAPKPDKDASSSSDSSQVNPTAVNSGMKIGVCGKWVSLGLALVATMMQG* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1379 292 ProSiteProfiles FAS1/BIgH3 domain profile. 72 216 IPR000782 -
Apr3g1379 292 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 290 - -
Apr3g1379 292 SUPERFAMILY FAS1 domain 65 219 IPR036378 -
Apr3g1379 292 MobiDBLite consensus disorder prediction 231 264 - -
Apr3g1379 292 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 290 IPR045003 -
Apr3g1379 292 MobiDBLite consensus disorder prediction 36 70 - -
Apr3g1379 292 Gene3D FAS1 domain 57 218 IPR036378 -
Apr3g1379 292 SMART fasc_3 114 219 IPR000782 -
Apr3g1379 292 MobiDBLite consensus disorder prediction 36 65 - -
Apr3g1379 292 Pfam Fasciclin domain 84 218 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1379 Apr-Chr3 28272714 28273861 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1379 - - gmx:100819833 373.244