Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1378 ATGAAACAAGCTACCCTTTTCTCCCTTCTCTTCCTAGTCTTATTTTTCACCACCTTAACCTTAGCCTTTGCCATTTCACCAGCACCAGCAGCAGCACCAAAAGCCCCAACAAAACCTCACCCTACCCCAAAAGCCACAGCACCATCACCAAAACCATTAGTCCCAACATTACCTGAGTCCCCAGATTCCCCAGACTCAGTCCCTGATGACATCACAAGAATCCTCAAAAAGGCCAAATCATTCACAGTCCTAACGCGCCTCCTCAAAACCACCGAAATCATGAACAACATAAACTCACAACTCATAACAGCCAAGAGTGGAGGCATCACCATCCTTGCACCAGATGATTCAGCCTTTTCCCAACTCAAAGCAGGGTTCCTTAACTCTCTTAACGAAGGCCAAAAAATCGAACTTGTGCAGTTCCACATCTTACCCGAGTTTGTATCAAGCTCAAACTTCGATTCTCTTAGCAATCCAGTTCAAACCGTAGCTGGTAAAGATCCCGCAAGGCTTCCACTGAACGTGAATGCATTAGGAAACAGTGTGAACATTTCAACTGGGGTGGTTAATGCCACCATTTTAGGGGTAGTTTACTCGGATAATAAGCTTGCTATTTACCATGTGGATAAGGTGCTTCTTCCCCTTGATTTCTTTGTAACTAAGGCTCCAGCTTTGGCTCCAACCACTCTTGCTAAGGCTCCTAAAGCTGCTAAAGAGAACTCTTCTGAGGATGATCAAGATGAAACAAACCACGATCACCAGAAATCTGGTTCTGTGGGTTTTGTTAACGTTCGTGGAACAACGTTGGTGTCTCTTGGGATGTGTTTGGTGGCCTTTGCAACTATGTGGAGTTGA 855 0.4515 MKQATLFSLLFLVLFFTTLTLAFAISPAPAAAPKAPTKPHPTPKATAPSPKPLVPTLPESPDSPDSVPDDITRILKKAKSFTVLTRLLKTTEIMNNINSQLITAKSGGITILAPDDSAFSQLKAGFLNSLNEGQKIELVQFHILPEFVSSSNFDSLSNPVQTVAGKDPARLPLNVNALGNSVNISTGVVNATILGVVYSDNKLAIYHVDKVLLPLDFFVTKAPALAPTTLAKAPKAAKENSSEDDQDETNHDHQKSGSVGFVNVRGTTLVSLGMCLVAFATMWS* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1378 284 ProSiteProfiles FAS1/BIgH3 domain profile. 68 212 IPR000782 -
Apr3g1378 284 MobiDBLite consensus disorder prediction 237 254 - -
Apr3g1378 284 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 284 IPR045003 -
Apr3g1378 284 PANTHER FASCICLIN DOMAIN PROTEIN 7 284 - -
Apr3g1378 284 SUPERFAMILY FAS1 domain 48 215 IPR036378 -
Apr3g1378 284 MobiDBLite consensus disorder prediction 32 62 - -
Apr3g1378 284 Pfam Fasciclin domain 80 214 IPR000782 -
Apr3g1378 284 MobiDBLite consensus disorder prediction 230 258 - -
Apr3g1378 284 SMART fasc_3 110 215 IPR000782 -
Apr3g1378 284 MobiDBLite consensus disorder prediction 32 68 - -
Apr3g1378 284 Gene3D FAS1 domain 57 214 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1378 Apr-Chr3 28268549 28269629 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1378 - - gmx:106794109 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1378 3 28268549 28269629 Apr3g1378 3 28268549 28269629 ECH