Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1377 ATGAAGCAAGTTTTGTTCTCCCTCTTACTCCTGCTTTTTTCTTCATTACATTCAACCACATCATTAGCACAAGCACCTGATGCAGCCCCTAAAGCCCCAGCAAAACCAATTGTCCCAACACTACCCCAATCACCATCTTCTGATCCCTCTGATTCTTCCACTGATGACATCATCACAATTTTGAGAAAGGCCAAATCATTCAACATCTTAATTCGCCTATTGAAAACCACACAATTGATCAATCAAATCAATGCACAGATCATGACCACAAAATCTGGTGGCTTAACAATCTTTGCACCTGATGATGGTAGCTTTTCACAGCTAAAAGCAGGGTTCCTCAACTCTCTAGGTGACAACCAAAAGATAGAATTTTTACAGTTCCATGTTCTACCCATTTATGTTTCAAGCTCAAATTTCGATTCTTTGACCAACCCCGTGAGAACACTAGCCGGTGATAACCCAAGTAGGTTGCAACTAAACGTGACAGCTTTTGGCAACAATGTGAATATCTCAACAGGAGTGGTTAATGCTACTGTCACAGGAATTGTTTACTCTGACAAGGTGCTTGCAATATATCATGTTGACAAGGTGCTTCTTCCTTTGGACTTCTTCATACCTATGCCTCCAAGTCCCGCACCCTCTCTCGCAACAGCACCAAAAACTTCCGGTGACGATGATGATCGAGTTGGAACATCCAAGGACAGTTCTGGAGCATTCAGTTTGATAAGCATTCAAGGAACAACGTTGGTGTCCATTGGAGTTGCTTTGGTTGCGTTGCTGATTATGTCAAGTTGA 795 0.4226 MKQVLFSLLLLLFSSLHSTTSLAQAPDAAPKAPAKPIVPTLPQSPSSDPSDSSTDDIITILRKAKSFNILIRLLKTTQLINQINAQIMTTKSGGLTIFAPDDGSFSQLKAGFLNSLGDNQKIEFLQFHVLPIYVSSSNFDSLTNPVRTLAGDNPSRLQLNVTAFGNNVNISTGVVNATVTGIVYSDKVLAIYHVDKVLLPLDFFIPMPPSPAPSLATAPKTSGDDDDRVGTSKDSSGAFSLISIQGTTLVSIGVALVALLIMSS* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1377 264 SMART fasc_3 96 201 IPR000782 -
Apr3g1377 264 MobiDBLite consensus disorder prediction 27 53 - -
Apr3g1377 264 ProSiteProfiles FAS1/BIgH3 domain profile. 54 198 IPR000782 -
Apr3g1377 264 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 261 IPR045003 -
Apr3g1377 264 Gene3D FAS1 domain 38 200 IPR036378 -
Apr3g1377 264 PANTHER FASCICLIN DOMAIN PROTEIN 1 261 - -
Apr3g1377 264 Pfam Fasciclin domain 66 200 IPR000782 -
Apr3g1377 264 SUPERFAMILY FAS1 domain 49 201 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1377 Apr-Chr3 28263734 28264712 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1377 - - gmx:100791112 359.762