Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1372 ATGGGTGGAAGAAAGTGGAGCCTTATGGTGGCGTTGTTCATCTTACTCATTGCTATGGAAGCTGCCATTGCTCAAGGTCCTCAAGGAAATGGTAAAGGTAATGATCAAGGGAAGGGTAATGGTAATGGCAATGGCAATGGCAATGACAATGGGAAGGGAAAGGATAAGAAAGGAAGCAAGGAAAAGGATAAAGGAAAGAAAAAAGAGAAGAAGCCAAAGAAGGGTGATAATGAAGCATCGAATTATAAGAGCTTGTCACCTCTTCCATCGGGTCAAGAAAGAGGGTTCTGCGCACTAAACACTACGTGTAAGGGTACGACCATCGTGTGTCCACCCGAGTGCGCAATTAGGAAGCCTAAGAAAAACAAGAAGCAGAAGGCATGTTTCATCGATTGCTCTAACCCCAAATGTGAAGCCAAATGCAAGACTAGAAAAGCCAACTGTGATGGGTATGGTGCACTGTGCTATGATCCTCGCTTTGTTGGCGGTGACGGCGTGATGTTCTACTTCCACGGTGCCAAAGGAGGAAACTTTGCCATTGTTTCTGATGATGAATTCCAAATCAATGCCCATTTCATTGGTACTAGACCACAAGGAAGGACTCGTGACTATACATGGGTGCAAGCACTTTCTGTCATGTTTGACGCGCACACTCTTGTTATTGCAGCCAATAGAGTATCTCACTGGGAGGACAGCGTTGACACTCTTACTATAAAGTGGGATGGTGAACTAGTCAACGTTCCAAAGGATGGAGAAGCTGAATGGAGGGTCAATGGTGATCAAAGAGAAGTGGTTGTGGAGAGAACTGATGAGACCAACAGTGTGACAGTGAGAGTTTCAGGTTTGGTTGAAATGGATATAACTGTTAGGCCTATTGGAGAAAAAGAAAACAAGGTTCACAATTACCAATTGCCACCAGATGATGCTTTTGCTCATTTGGAGACACAGTTCAAGTTTAAAAAAGATACTGATAATTTTGAAGGAGTTTTGGGTCAGACTTATAGGCCTGGCTATGTTAGCACTGTTAAGAAAAGTGTTCCTATGCCAATGATGGGTGGTGAGGACAAGTACCAAACTCTCTCTCTGTTTTCAACATCCTGCAATCGCTGCAGGTTCAAGAGGCCATCCGGGATTGCAAGCAGTGAAGGAGTAATTGCTCAGTATTGA 1167 0.4404 MGGRKWSLMVALFILLIAMEAAIAQGPQGNGKGNDQGKGNGNGNGNGNDNGKGKDKKGSKEKDKGKKKEKKPKKGDNEASNYKSLSPLPSGQERGFCALNTTCKGTTIVCPPECAIRKPKKNKKQKACFIDCSNPKCEAKCKTRKANCDGYGALCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDEFQINAHFIGTRPQGRTRDYTWVQALSVMFDAHTLVIAANRVSHWEDSVDTLTIKWDGELVNVPKDGEAEWRVNGDQREVVVERTDETNSVTVRVSGLVEMDITVRPIGEKENKVHNYQLPPDDAFAHLETQFKFKKDTDNFEGVLGQTYRPGYVSTVKKSVPMPMMGGEDKYQTLSLFSTSCNRCRFKRPSGIASSEGVIAQY* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1372 388 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 1 378 - -
Apr3g1372 388 Pfam Root cap 316 372 IPR009646 -
Apr3g1372 388 PANTHER ROOT CAP/LATE EMBRYOGENESIS-LIKE PROTEIN 1 378 - -
Apr3g1372 388 MobiDBLite consensus disorder prediction 28 87 - -
Apr3g1372 388 MobiDBLite consensus disorder prediction 29 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1372 Apr-Chr3 28221008 28222820 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1372 - - gmx:100789697 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1372 3 28221008 28222820 Apr3g1372 3 28221008 28222820 ECH