Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1370 ATGACAAAGAAAATGCGTTTGGATTGTTCCTTGCAGGAGGGGAATGAAGAGAAAGTGGATAGCTTTGTGGAATTGGATACAAGGGAAAGAGTGAATGATGGTTTTTCTAGAATTGGACCAAATGATTCACTTCTTCCTGGTCTTATTGATGATGTTGCACTGAATTGTCTTGCTTGGGTTAGTAGATCTGATTATGCTTCACTAGCATGTATAAATAAAAGGTACAACTTGCTGATTAGAAGCGGGTATCTATCCGGGTTGAGGAAAAAGTTGGGGATTGTGGAGTTGGAGCATTTGGTTTATTTGGTTTGTGATCCAAGAGGTTGGGAGGCTTTTGACCCTAAGAGAAATAGATGGATAACATTACCTAAGATTCCTTGTGATGAGTGTTTTAACCATGCAGATAAGGAGTCCTTGGCTGTGGGGAGTGAATTGTTGGTTTTTGGTAGGGAATTGATGGATTTTGCCATTTGGAAGTACAGCTTGATTTGTCGTGCTTGGGTGAAGTGTCATGAGATGAACCGACCTCGCTGCTTGTTCGGATCTGGCAGTCTCGGTTCAATTGCTATTGTTGCTGGTGGAAGTGATAAATATGGAAATGTTCTAGAGTCTGCGGAGTTGTATGACTCTTCTTCAGGTACATGGGAACTGTTACCAAACATGCATACACCACGTAGATTGTGCTCTGGTTTTTTTATGGATGGCAAATTCTATGTGATTGGTGGCATGTCAAGTCCTACTGTTTCATTGACTTGTGGGGAGGAGTATGATCTTAAGACAAGAAATTGGCGGAAGATAGAGGGTATGTATCCATATGTTAATGGGGCTGCTCAGGCACCTCCACTTGTGGCAGTTGTGGATAATCAGTTATATGCAGTTGAGCATCTTACCAACATGGTGAAGAGATATGATAAGGAAAAGAACACCTGGAATGAATTGGGAAGGCTTCCAGTTCGGGCTGATTCTTCTAATGGATGGGGCTTGGCTTTCAAGGCTTGTGGGAAGAAACTTCTGGTTGTGGGTGGACAAAGGGGTCCAGAAGGTGAAGCTATTGTACTGAATTCATGGTGTCCTAGGGCAGGGGTCAGTAATGGCACCATTGATTGGCAGGTACTTGGTGTGAAGGAGCATGTTGGGGTGTTTGTGTACAATTGTGCAGTTATGGGTTGGTCTGGTGAGATGCTTTTAGATTGA 1194 0.4305 MTKKMRLDCSLQEGNEEKVDSFVELDTRERVNDGFSRIGPNDSLLPGLIDDVALNCLAWVSRSDYASLACINKRYNLLIRSGYLSGLRKKLGIVELEHLVYLVCDPRGWEAFDPKRNRWITLPKIPCDECFNHADKESLAVGSELLVFGRELMDFAIWKYSLICRAWVKCHEMNRPRCLFGSGSLGSIAIVAGGSDKYGNVLESAELYDSSSGTWELLPNMHTPRRLCSGFFMDGKFYVIGGMSSPTVSLTCGEEYDLKTRNWRKIEGMYPYVNGAAQAPPLVAVVDNQLYAVEHLTNMVKRYDKEKNTWNELGRLPVRADSSNGWGLAFKACGKKLLVVGGQRGPEGEAIVLNSWCPRAGVSNGTIDWQVLGVKEHVGVFVYNCAVMGWSGEMLLD* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1370 397 SUPERFAMILY Kelch motif 108 347 IPR015915 GO:0005515
Apr3g1370 397 Gene3D - 100 374 IPR015915 GO:0005515
Apr3g1370 397 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 33 389 - -
Apr3g1370 397 SMART kelc_smart 188 235 IPR006652 GO:0005515
Apr3g1370 397 SMART kelc_smart 236 288 IPR006652 GO:0005515
Apr3g1370 397 Pfam Kelch motif 224 269 IPR006652 GO:0005515
Apr3g1370 397 Pfam Kelch motif 176 221 IPR006652 GO:0005515
Apr3g1370 397 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 33 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1370 Apr-Chr3 28199053 28202854 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1370 48 267 Miscellaneous Gene Families AT4G33900 27.727 5.48e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1370 - - gmx:100792139 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1370 3 28199053 28202854 Apr3g1370 3 28199053 28202854 ECH