Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1359 ATGATCGACGACGAGAGAGAGGGAGAGATTAGGGATGCTATCGAACTTGCTTCGGACGATGCGCTATCCAGCCCTAGCAGTAGTGGTTACGTCGGCGAAAGAGGCAGCACCAGTGCCACCAGCGATTCTCAAATTGAGATTGAGCATGAAGAAATAGAGGAGGATGCGAGGATTGAAATCGATTCAATCTCAATCTCCGACTCCCACCATTCTTGGATTCCTGGAAAACGGCATCTCGACGAGGATGATGCTTCCATATCATGGAGGAAAAGGAAGAAGCATTTCTTTATTCTCAGTCATTCTGGCAAACCTATATATTCTAGGTATGGAGATGAACACAGGCTTGCAGGGTTTTCAGCAACTTTGCAAGCAATCATTTCCTTTGTTGAGAACGGGGGTGACTCTATCAAATTGGTGAGGGCTGGAAAGCATCAGGTGATTTTTCTTGTGAAAGGACCAATCTACTTAGTCTGCATCAGCTCCACAGAAGAACCTTATGAATCATTAAGGGGGCAGTTGGAGCTGATTTACGGTCAGATGCTTGTTATACTTACAAAATCAGTAAACAGATGTTTTGAGAAGAATCCAAAATTCGATATGACACCCTTGCTTGGCGGAACAGACATTGTCTTCTCTTCACTAATTCACTCTTTCAGTTGGAACCCAGCTACATTTCTTCATGCCTATACTTGTCTTCCTCTTGCATATGCAACAAGGCAAGCTGCGGGAGCTATCTTGCAAGACATTGCTGATTCAGGTGTTTTGTTTTCTATACTGATGTGCAGGCACAAGGTGATCAGTCTTGTCGGTGCACAGAAAGCTTCCCTTCATCCTGATGATATGCTGCTGCTGGCCAAATTTGTCATGTCATCTGAATCCTTCAGGATGTCAGAATCTTTTTCTCCAGTTTGCTTGCCAAGATATAATCCTTCAGCATTTTTGTATGCTTATATCCATTTCTTTGATGCTGACACATATTTGATCTTGCTAACCACTAGTTCAGATGCATTTTATCATCTTAAGGATTGCAGGATTCGCATCGAGATGGTCCTTTTGAAGTCTAGTGTCCTCAGTGAAGTTCAGAGATCCTTGCTAAACGGTGGAATGCATGTTGAGGATCTGCCACCTATACCTCATTCTGGATCATCTCATTTGGGCCAGCACATGCCTCCACCAGATTCTCCTGAAAGATTTAGGGAACCAAATTCTGGCACTGGGGGTCCTGCTGGATTGTGGCATTTCATATACCGCAGTATATATTTGGATCAATATCTCTCTTCAGAGTTTTCATCATCAATTAACACACCTCAGCAGCAGAAAAGACTGTATAGAGCTTACCAGAAGCTTTTTGCATCCATGCATGCCAAAGGAATTTGGCCACACAAAACTCAATTTAGGAGAGATGAAAACTACGTTCTTCTCTGTTGGGTGACACAGGATTTTGAGCTTTATGCTGCCTTTGATCCCCTTGCAGACAAGGCCTTGGCGATAAAGACTTGCAACCATGTTTGTCAATGGATAAAAGATGTAGAAAATGAAATATTTTTACTAGGAGCTAGCCCCTTTTCATGGTGA 1575 0.4298 MIDDEREGEIRDAIELASDDALSSPSSSGYVGERGSTSATSDSQIEIEHEEIEEDARIEIDSISISDSHHSWIPGKRHLDEDDASISWRKRKKHFFILSHSGKPIYSRYGDEHRLAGFSATLQAIISFVENGGDSIKLVRAGKHQVIFLVKGPIYLVCISSTEEPYESLRGQLELIYGQMLVILTKSVNRCFEKNPKFDMTPLLGGTDIVFSSLIHSFSWNPATFLHAYTCLPLAYATRQAAGAILQDIADSGVLFSILMCRHKVISLVGAQKASLHPDDMLLLAKFVMSSESFRMSESFSPVCLPRYNPSAFLYAYIHFFDADTYLILLTTSSDAFYHLKDCRIRIEMVLLKSSVLSEVQRSLLNGGMHVEDLPPIPHSGSSHLGQHMPPPDSPERFREPNSGTGGPAGLWHFIYRSIYLDQYLSSEFSSSINTPQQQKRLYRAYQKLFASMHAKGIWPHKTQFRRDENYVLLCWVTQDFELYAAFDPLADKALAIKTCNHVCQWIKDVENEIFLLGASPFSW* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1359 524 PANTHER BNAC04G15860D PROTEIN 12 524 - -
Apr3g1359 524 Pfam Third Longin domain of FUZ, MON1 and HPS1 410 511 IPR043970 GO:0016192
Apr3g1359 524 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 93 110 IPR004353 GO:0006623
Apr3g1359 524 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 111 131 IPR004353 GO:0006623
Apr3g1359 524 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 145 159 IPR004353 GO:0006623
Apr3g1359 524 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 196 208 IPR004353 GO:0006623
Apr3g1359 524 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 225 246 IPR004353 GO:0006623
Apr3g1359 524 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 249 262 IPR004353 GO:0006623
Apr3g1359 524 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 273 289 IPR004353 GO:0006623
Apr3g1359 524 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 298 321 IPR004353 GO:0006623
Apr3g1359 524 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 326 352 IPR004353 GO:0006623
Apr3g1359 524 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 473 487 IPR004353 GO:0006623
Apr3g1359 524 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 489 502 IPR004353 GO:0006623
Apr3g1359 524 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 502 522 IPR004353 GO:0006623
Apr3g1359 524 PANTHER SAND PROTEIN-RELATED 12 524 IPR004353 GO:0006623
Apr3g1359 524 MobiDBLite consensus disorder prediction 380 402 - -
Apr3g1359 524 MobiDBLite consensus disorder prediction 15 45 - -
Apr3g1359 524 Pfam Second Longin domain of FUZ, MON1 and HPS1 254 345 IPR043971 GO:0016192
Apr3g1359 524 MobiDBLite consensus disorder prediction 20 43 - -
Apr3g1359 524 Pfam First Longin domain of FUZ, MON1 and HPS1 93 213 IPR043972 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1359 Apr-Chr3 28109530 28115088 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1359 K20195 - gmx:100814534 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1359 3 28109530 28115088 Apr3g1359 3 28109530 28115088 ECH
Apr2g2201 2 27202604 27208607 Apr3g1359 3 28109530 28115088 PCT