Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1351 ATGGGTTTTGGTCGAAATTCGACCGTGAGAAGTGGAGATTACTTGGAAGGAATGCTTAATGATTATGTTGGAGGAAGGGCCAAAGTGAAGGCTCAAAAAAGTGCCTCCACAAAGTTTGTGGCAGCTCTCACATGTCTTCAGTTTTTCTTTGCAGTTTATGCAACATTCCTATTGTATTATATGGGTCCTTCTATTGATTTAAGAACCAGGCCAGATTTTACATGGGCTACACGAATTGCCCAACAATGGAAGCAACTTATGATCACACCCCATGTTGTTGGTCACTACCAAGAAGCTGCTTCTTCTCTCATCATGGAGGATAATGTTCTACCAACAACACCATCCCAAGTTTGTGAGAATGAGAAGATAGATTTCATGCAAAAGAAGTCCAATGATGTGCAAATGATCAAGTTAAAGAGAGAACTTTATGAGGAGGTTTTGAACTTCCAAAGCAAAACCATTGGCACTGAGACGCTTCAAGAGCTGATGGCAATGAAATCCATATGGGACTTGAATGGTCCAAACAGGCCAAAAATCACAGTCTTGTTAAACCACTTCAAGAGAAAAACTCTTTGTTCTCAGCTTGATTCTTTGCTCCAACAGACCCTCCCTTTCCATCATGTTTGGGTGCTCTCATTTGGGAGCCCAAATGAGGCCTCACTCAGGAGAATTGTGGAGACATATAACAATTCAAGAATCAGCTTCATAAGCTCAACCTATGATTTCAAGTACTATGGGAGATTTCAAATGGCTTTGCAAACTGAAGCTGATTTGGTGTATATTGTTGATGATGACATGATTCCTGGGAGGAAGATGTTGCAGATTTTAGCACATGTGGCTGGGACAGACAAGTACAAGAACTCTGTGTTGGGAAGTATAGGAAGGATATTGCCTTTTAGACAGAAGGACTTCACTTTTCCAAGTTATAGAAAATTTCGGTCTAAAGAGGCAGGGCTTTATTTGCCAGATCCTGCTTATGATATCATGGTTGATAAAATTATGCAGGTGGATTTTCTATCTAGTTCATGGTTTCTATCTGCTGAGCTTGTCAAGACACTCTTCATTGAGACACCTTTTACCTTCTCAACTGGTGAAGATCTGCACCTCAGCTACCAGCTTCAGAAGTACAGAAATGCTGGCTCTTTTGTTCTTCCAACAGACCCTACGGACAAGGAAACATGGGGTGATAGTGAACACAGGCTTGCATATGTGTCTGAAACCACAGTGATTTTCAAGGACATAGTTCAAGTCAGAGATGATCAATGGTGGAAAGCACTTTCTACAGGTTATGTGACCCAATGGGCAGCAATGTACCCTCAAAAAATTGATGCACTTTTTTATGCGCACTCACTTGATGAAGTAAAAGCACTTGCACCACTTCTTGAAAAGTTCCGGTCCACAGTTGGCAAAAAGGCCTACATTGTTGTCTCTGGTGGCAATTTTTGTCCCTGTGAAGATGCTGCAACAGCTTTGAAATGGCCTATAGTGGTTTGCAAAGAACGTCGTTTTAAGATTTTTGATTTGGCAATTGGATCACTCTCTGGTGTATCAAACTCAGAGGCACCAGTGATACAAGCAGTGTACACCAGCATGAAGGGTTTGATCAAAATTCACAATCCTAGTGTAGTGATCACTGTAGCTGACACTGACCCTCATGTGAAAAACGCTTTGAAGATGGCATCAGAAACAAATTCAAATGTCACCGCATTGGTTCTTTTACCCAGGGCTTCAGTGTCTAAAGTTCTTTGGATGGCTGATTTACGTTCAACAGCATTGCCAAATTGGAACCGGATGAGGATTTCCGTGAACATCATTACTCAAAATAGAGTCAATTCACTAGCAAGGCTTCTAAAATCTCTCAGCAATGCCTACTATCTAGGAGATGAAGTTCCAATTACCTTCAACATGGATAGCAAGGTAGATGAGGCAACAATAAAACTAGTGGGTTCATTTGAGTGGCCTCACGGGCCCAAAACCCTCAGAAGGAGAATCATCCAAGGTGGGCTCATCCGGGCTGTTAGTGAAAGCTGGTACCCATCTTCTGATGATGACTTTGGGCTTCTACTTGAAGATGACATAGAAGTTTCTCCTTACTATTACCTATGGATCAAATATGCACTCATGGCTTACCACTATGATCCTCAAATTTCTCTCCCTGAACTCTCCTCAATCTCACTCTACACTCCAAGACTTGTTGAAGTTGTCAAAGAAAGGCCCAAATGGAATGCCACTGAATTCTTCAAACACATCCATCCCAACACACCTTACCTCCACCAATTACCCTGTAGTTGGGGGGCAGTGTTCTTCCCTAAGCATTGGAGAGAGTTCTATGTGTACATGAACATGAGGTTCACTGAGGATGCCAAGGCCAACCCAGTTCAAATTCCAAAGTCTAGAACAAATGGATGGCAAGCTTCATGGAAGAAGTTCCTCATAGACATGATGTACCTTAGAGGGTATGTTAGTCTCTACCCAAATTTCCCACAACAAGCAAGCTTTTCCACCAACCATATGGAACCCGGGGCACATATTAGTGCAAAAAACAATGTTGTTAAACATAACAAACAGGACTTTGAGGTGCCATTGTTGAAGGAAGATTTTAGAAACTTTTTGCCAGGAATGAAAATGCCACCAGCTTCAAGACTTCCATCTCTAAACCTCTTCAATCAACCAGTTTCTCTGAAGGGTCTCAAAGCTGCTGGAGCTAAGTTGGGCCAAGATGTTCTAAGATGTAACAATGCCACTGAGGTAGTTGTTGTTGATCAAGATACCGGTCTACCTCATAGCTGCTCCAAATTCTGA 2802 0.4201 MGFGRNSTVRSGDYLEGMLNDYVGGRAKVKAQKSASTKFVAALTCLQFFFAVYATFLLYYMGPSIDLRTRPDFTWATRIAQQWKQLMITPHVVGHYQEAASSLIMEDNVLPTTPSQVCENEKIDFMQKKSNDVQMIKLKRELYEEVLNFQSKTIGTETLQELMAMKSIWDLNGPNRPKITVLLNHFKRKTLCSQLDSLLQQTLPFHHVWVLSFGSPNEASLRRIVETYNNSRISFISSTYDFKYYGRFQMALQTEADLVYIVDDDMIPGRKMLQILAHVAGTDKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDIMVDKIMQVDFLSSSWFLSAELVKTLFIETPFTFSTGEDLHLSYQLQKYRNAGSFVLPTDPTDKETWGDSEHRLAYVSETTVIFKDIVQVRDDQWWKALSTGYVTQWAAMYPQKIDALFYAHSLDEVKALAPLLEKFRSTVGKKAYIVVSGGNFCPCEDAATALKWPIVVCKERRFKIFDLAIGSLSGVSNSEAPVIQAVYTSMKGLIKIHNPSVVITVADTDPHVKNALKMASETNSNVTALVLLPRASVSKVLWMADLRSTALPNWNRMRISVNIITQNRVNSLARLLKSLSNAYYLGDEVPITFNMDSKVDEATIKLVGSFEWPHGPKTLRRRIIQGGLIRAVSESWYPSSDDDFGLLLEDDIEVSPYYYLWIKYALMAYHYDPQISLPELSSISLYTPRLVEVVKERPKWNATEFFKHIHPNTPYLHQLPCSWGAVFFPKHWREFYVYMNMRFTEDAKANPVQIPKSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPQQASFSTNHMEPGAHISAKNNVVKHNKQDFEVPLLKEDFRNFLPGMKMPPASRLPSLNLFNQPVSLKGLKAAGAKLGQDVLRCNNATEVVVVDQDTGLPHSCSKF* 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1351 933 SUPERFAMILY Nucleotide-diphospho-sugar transferases 174 376 IPR029044 -
Apr3g1351 933 CDD Glyco_tranf_GTA_type 189 280 - -
Apr3g1351 933 PANTHER - 27 933 - -
Apr3g1351 933 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 170 387 IPR029044 -
Apr3g1351 933 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 599 849 IPR029044 -
Apr3g1351 933 PANTHER OSJNBA0004B13.7 PROTEIN 27 933 - -
Apr3g1351 933 SUPERFAMILY Nucleotide-diphospho-sugar transferases 597 789 IPR029044 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1351 - - gmx:100790938 1761.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1351 3 28030117 28033918 Apr3g1351 3 28030117 28033918 ECH