Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1343 ATGGAAAAGCTTGCTAAACATGTTTTGATTTGCGGTTTATTAACCTCACTTGTTTGGCTTTCGTACCCAGTAATGGCTCAAGAAGTTGAGGACGAGAGCGAGTTCAATTATGATGTACACAGTGAAAGAGGACCATTTCATTGGGGTGAGATTAGACCCGAATGGAGAATGTGCAACAATGGATCAATGCAATCGCCAATTGATTTGTTGAATGAGAGGGTTCAAATAGTATCCCATTTGGGAATGCTTCAAATTAACTACCAGCCCTCCAATGCAACTATTAAGAATAGGGGCCATGATATCAAGATGGAATGGCTTGCGAACACAAGCTATCTACAAATTAATGGTACTCAGTATGTACTTAAGCAGTTCCATTGGCATTCCCCCTCTGAACACACCATAGATGGCAAAAGGTTGGATTTAGAGTTACACATGGTGCATGAAACTCCATCAGGAAAAACTGCTGTGATTGGAATATTGTACAAGGCTGGAAAACCAGATCCTTTATTGTCATTGTTAACGAATCACTTAGAGGCCATTTCTAATAGCACGGGAGAAGAAACAGAAGTGGGTGTAATGGATCCTAGCCTGGTTAAAATAGGAACAAACAGAACACTGTATTACAGATATATTGGTTCCCTCACTACTCCTCCATGCACCGAGAATATTACTTGGACCATCCTTAGAGAGGTGAGATCCGTTTCAAGGGAGCAAATCAAATTGCTTCGAGATGCTGTTCATGATGACTCAGAGGCTAATGCAAGACCATTGCAACCAATAAACAACCGGTTAGTGCAGCTCAATAAACCGAAAGAGGATCAACGTTAA 828 0.4106 MEKLAKHVLICGLLTSLVWLSYPVMAQEVEDESEFNYDVHSERGPFHWGEIRPEWRMCNNGSMQSPIDLLNERVQIVSHLGMLQINYQPSNATIKNRGHDIKMEWLANTSYLQINGTQYVLKQFHWHSPSEHTIDGKRLDLELHMVHETPSGKTAVIGILYKAGKPDPLLSLLTNHLEAISNSTGEETEVGVMDPSLVKIGTNRTLYYRYIGSLTTPPCTENITWTILREVRSVSREQIKLLRDAVHDDSEANARPLQPINNRLVQLNKPKEDQR* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1343 275 SUPERFAMILY Carbonic anhydrase 34 265 IPR036398 -
Apr3g1343 275 SMART Carb_anhydrase_2a 37 269 IPR001148 -
Apr3g1343 275 MobiDBLite consensus disorder prediction 250 275 - -
Apr3g1343 275 ProSiteProfiles Alpha-carbonic anhydrases profile. 33 269 IPR001148 -
Apr3g1343 275 PANTHER BIFUNCTIONAL MONODEHYDROASCORBATE REDUCTASE AND CARBONIC ANHYDRASE NECTARIN-3 22 272 - -
Apr3g1343 275 Pfam Eukaryotic-type carbonic anhydrase 44 268 IPR001148 -
Apr3g1343 275 Gene3D Alpha carbonic anhydrase 31 274 IPR036398 -
Apr3g1343 275 PANTHER CARBONIC ANHYDRASE 22 272 IPR023561 GO:0004089|GO:0008270
Apr3g1343 275 CDD alpha_CA_prokaryotic_like 44 267 IPR041891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1343 Apr-Chr3 27920363 27922589 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1343 K01674 - gmx:100811978 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1343 3 27920363 27922589 Apr3g1343 3 27920363 27922589 ECH
Apr3g1343 3 27920363 27922589 Apr2g2187 2 27025014 27027902 PCT