Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1340 ATGGAAACTCAAGTAGAATTCTCATCATCACTACACTCTCCCTCTGATATCATTAGAAAAAAGAAAATTACTGGACGACAAAAAAGAGAGGAACTTGAAAGAGAGGTAGCTATGCTTCAAAGGTTGTTGGACCAAGAAGAAAAGGTTCATGAGATCTTGGAGATGGTTCACAACAGACCAAATGGTTCAGCGATATCTATTCCAAATTTTCTTCCGCCCAAGATGAGGGAAATCTTAACAGAGCTAGTCATGGTTGAGGGTGAGATAGCGCGACTTGAATGCCAAATAGGCCAACTCCAAGCTGGTTTGAAGCATGAACAAGAAGTCACAAAGGAATCAAAGTCAAAAACATGGAATCAAGGGAATATGAGCAATTCTAACAATCATTTATCAACTACAACAATTCCAAATCCTAGTCCTATTCGAAGAAGTGTTCAAGAAAGGATGGCATTTGAAACAAAGGCATTGCATTTCATAAGCAAAGCTATAAAGGGCGATTATAATCTCAATGATTTTAGTCTAAATGATAAAACAGGTTTTCTTAAAAATTCTGTTGAACAGAAAGAAAATAAATTCCAAGAAGATGTGAAATTTCAAGAAAGACTTACGAGAAAAAATGGGATAGTGAAGCCTCCTTCACCTATGCGTGATCCCCGCCATCCATCGCCCAAGCTGCGAGAACGTAATCCAGAGATGTACTTGGATCTCCCAACTAGATCACTATTAGATCCACTTCTGTCAGAAGAGAATGATCTTAAGTGGCAACCCAACAAGCTATCTGAGAGCATCATGAAGTGTTTGAATTTCATATATGTGAGATTACTCAGAACATCAAGAGCAATGGAATTGGAGAAATCAGGACCCATTTTAAGGTCTGTGCATTCTTCTTTAAGCTCAAGAAGCTTCAGGGTTGATACTGGGTCAAACCCAAAATCAAACCTTTTGTTGCAAAAGGAATCAAGGCAACAAGACCCATATGGTATTTTTTATACAGAAGAGTCTATTCCAAGGGACATTGGTCCTTATAAGAACCTGGTTATATTCACCTCAAGCTCTATGGATCCAAAATTTATCTCAAGTCCATCCTCTATACCATTGCTAAGGAAGTTAAGGATCTTGATGAGCAACCTTCAGACTGTTGATTTGAAAAGCCTTACAAACCAACAGAAGTTAGCATTCTGGATCAACGTGTACAATGCTTGTATTATGCATGGATTTATCCAATATGGTGTGCCGTCCACCCCAGAAAAACTACTTGCATTGATGAACAAGGCAACCCTCAATGTAGGAGGCAACATAATAAATGCTCAATCAATAGAGCATTTCATATTAAGGAAACGAGACACTTCTAATATGAAAGAGGGTGAGTGGGAGGAGAAAGAAACAGTTGTTCGTGAACTTTATGGACTTGAGTTTATGGATCCTAATATCACATTTGCTCTATGTTGTGGAACTCGTTCTTCTCCAGCTGTGAGGATATACACAGCCGATAGTGTTACAACTGAATTGGAAAAATCAAAACTAGACTATCTCCAAGCTTCAATTCTGGCTACAAGCACCAAAAGGGTAGCTTTCCCAGAGCTCCTCCTAAGAAACATGCATGATTTTGCTGGGGACACTGAGTTGCTGGTGGAGTGGGTATGCAACCAGTTACCCACATCTGGGACTCTAAGGAAATCCATGGTTGATTGCTTTAAAAGCCACAGTAATGTCAAGGCTTCTACCATTGTTGAAAAGATACCCTATGACTATGAATTCCAGTATTTGTTGACCATATAA 1779 0.3907 METQVEFSSSLHSPSDIIRKKKITGRQKREELEREVAMLQRLLDQEEKVHEILEMVHNRPNGSAISIPNFLPPKMREILTELVMVEGEIARLECQIGQLQAGLKHEQEVTKESKSKTWNQGNMSNSNNHLSTTTIPNPSPIRRSVQERMAFETKALHFISKAIKGDYNLNDFSLNDKTGFLKNSVEQKENKFQEDVKFQERLTRKNGIVKPPSPMRDPRHPSPKLRERNPEMYLDLPTRSLLDPLLSEENDLKWQPNKLSESIMKCLNFIYVRLLRTSRAMELEKSGPILRSVHSSLSSRSFRVDTGSNPKSNLLLQKESRQQDPYGIFYTEESIPRDIGPYKNLVIFTSSSMDPKFISSPSSIPLLRKLRILMSNLQTVDLKSLTNQQKLAFWINVYNACIMHGFIQYGVPSTPEKLLALMNKATLNVGGNIINAQSIEHFILRKRDTSNMKEGEWEEKETVVRELYGLEFMDPNITFALCCGTRSSPAVRIYTADSVTTELEKSKLDYLQASILATSTKRVAFPELLLRNMHDFAGDTELLVEWVCNQLPTSGTLRKSMVDCFKSHSNVKASTIVEKIPYDYEFQYLLTI* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1340 592 Coils Coil 75 95 - -
Apr3g1340 592 MobiDBLite consensus disorder prediction 112 140 - -
Apr3g1340 592 Coils Coil 29 49 - -
Apr3g1340 592 MobiDBLite consensus disorder prediction 114 140 - -
Apr3g1340 592 PANTHER EXPRESSED PROTEIN 8 592 - -
Apr3g1340 592 Pfam Protein of unknown function, DUF547 383 511 IPR006869 -
Apr3g1340 592 Pfam Leucine-zipper of ternary complex factor MIP1 25 106 IPR025757 -
Apr3g1340 592 PANTHER TRANSPORTER, PUTATIVE-RELATED 8 592 - -
Apr3g1340 592 MobiDBLite consensus disorder prediction 207 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1340 Apr-Chr3 27861664 27867668 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1340 - - gmx:100809848 1055.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1340 3 27861664 27867668 Apr3g1340 3 27861664 27867668 ECH