Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1336 ATGGGTGAGGTGGGTAAGATACTTTACATAGTCGTCGTCGACGATGCTCAGAAGAAAGAGTCCTTTCGCTACACGCGCCCCGTTCTTCACACCACTCTCCAGCTTATGGGATGCAAACCGCGTCATGCCTTCAAGATCAGCCAAAGAGTGTTTGAAGTCACAAAGAGAGAGAGTTGTATTAATGGTTTGCAACCTGAAGTAGAGTCTTTAGACTCTTTAGAAGGTTCTGATGCTCGCAAGGGGAATTCTGTGAAGAACGATGTTAATTGTGGTGGGGTTTGCATGGACAAAGCAGAATTAGGCAACCAATTACTTTCAGGAAGAATTTATAGAACTAAGAGTGTACCGTTTGAGTTGTACAAAAAGCGAACAACTGTATTTGTTCGGAGAGAAACTTTTCTCGATATTGTCTGTGATGCTCTGGCAGAGTATAAGTATGTGGGTCCTAACCAAAGAGCAGATTTGATATTAGCCTGCAGGATCCGTGAACGGAAAGAGTCTGTGACTGTGTTATTGTGTGGCACTAGTGGCTGTGGCAAATCCACATTGTCTGCATTGCTGGGTGGAAGGTTGGGAATCACGACAGTGGTATCAACTGATTCTATTAGGCACATGATGAGAAGTTTTGCTGATGAGAAGGAAAACCCCTTGTTGTGGGCTTCTACCTACCATGCAGGAGAGTGTTTGGACCCTGTTGCTGTTGCAGATGCAAAGGCCAGAAAGAAGGCAAAAAAGCTTGCTCGACGCTCACTTCCTAAGGATGAAATAACTGAGGGTCAAAGTTCTAGCAAATCTGATATACGGACATCAGAGATGAGCTCTGGTACTACTGAACTGCCAAGTCCAAAACAAATGGCTATTGAAGGATTCAAGGCGCAGAGTGAGATGGTGGTTGATAGTCTTGATAGGCTAATCACTGCATGGGAAGAACGAAAGGAGTCCGTTGTTGTCGAGGGCGTTCACTTGAGCCTCAACTTTGTTATGGGTCTCATGAAGAAGCATCCTTCAATCATACCATTCATGATACACATTACAAACGAGGACAAGCATTTGGAAAGATTTGCTGTACGTGCAAAGTATATGACACTGGACCCAGCTAAAAACAAGTATGTAAAGTATATTAGAAACATCAGAACAATTCAAGATTACCTCTGCAAGCGAGCTGAAAAGCATCTAGTTCCCAAAATAAACAATACAAACGTTGACAAGAGTGTGGCAGTCATCCATGCAACTGTTTTCAGCTGTCTTCGAAGGCGCGAAGGTGGGGAACACCTATATGATCCTACTAGAAACACTGTTACACTAGTGTATGAGGAATTTAGAAATCAATGTGCAGCCAATTCTTTGAACTCAAAAGGAATGTTTCAACTGATTCAGAGAAAAGGTTCTTCAAGGAATCTGATGGCTCTTGTTAATACTGATGGGTCTGTGGCAAAGGCTTGGCCTGTTAATTTAGTTGACTGTAATGGGAAGCCTGTGTGGTGCCATGGACCAGAGAATGGAATTGGACATCCAATGTATGGTCCCTTGCGAATTGGCAAGGCAGAACCTGTAAATCTTCAGTTTGGTTTTTATGGAATCAGTGCTTGGCCCAGTGATGGTGGCACTAGTCATGCTGGAAGTGTTGATGAGTCTAGAGCTGACGGGACTGATACGGGTAGTAGATATCACTCCTCTTGCTGTAGCTCACCAAGGTTTTCGGATGGCCCTTCCAAGGAGCTCAAAGAAGATTTCTCGGTGCATGGTAGTGATGAAGAGATTGACTACCAATTAGAGGTGGGCAGTGATGAGGATTTCAGTGATGATGTCGACAAACACATCCATGAAGAGGTGGGATCAGTTGATGAGGAATCGACAAAGTCCGATGAAGAGTACGAAGATCTTGCAATGCAAGATGTGCAGGAAGATTATGAGTTTAGGAGTAAGCTAGCTTTGGTGGGGGAGCTAGGAAATAAAATGCATGGGAATAACCATAATCAAAATCTTGATCTGTTCCTTAGAACTAAAAGTGAGCCTATGGCAGTTCCAGAGCCCTTGTGCTCTTATTCTTTGCTCGTTGGAAAGAGTGAGAGGAAAAACAAAATGAGAAAACGTTCACTTAGTATTCCCGCAATAGGAAAACATACTTCAGCAATCAATGATCCCATCCTTTCTGGTGCTCCTCAAAGGTAG 2172 0.4351 MGEVGKILYIVVVDDAQKKESFRYTRPVLHTTLQLMGCKPRHAFKISQRVFEVTKRESCINGLQPEVESLDSLEGSDARKGNSVKNDVNCGGVCMDKAELGNQLLSGRIYRTKSVPFELYKKRTTVFVRRETFLDIVCDALAEYKYVGPNQRADLILACRIRERKESVTVLLCGTSGCGKSTLSALLGGRLGITTVVSTDSIRHMMRSFADEKENPLLWASTYHAGECLDPVAVADAKARKKAKKLARRSLPKDEITEGQSSSKSDIRTSEMSSGTTELPSPKQMAIEGFKAQSEMVVDSLDRLITAWEERKESVVVEGVHLSLNFVMGLMKKHPSIIPFMIHITNEDKHLERFAVRAKYMTLDPAKNKYVKYIRNIRTIQDYLCKRAEKHLVPKINNTNVDKSVAVIHATVFSCLRRREGGEHLYDPTRNTVTLVYEEFRNQCAANSLNSKGMFQLIQRKGSSRNLMALVNTDGSVAKAWPVNLVDCNGKPVWCHGPENGIGHPMYGPLRIGKAEPVNLQFGFYGISAWPSDGGTSHAGSVDESRADGTDTGSRYHSSCCSSPRFSDGPSKELKEDFSVHGSDEEIDYQLEVGSDEDFSDDVDKHIHEEVGSVDEESTKSDEEYEDLAMQDVQEDYEFRSKLALVGELGNKMHGNNHNQNLDLFLRTKSEPMAVPEPLCSYSLLVGKSERKNKMRKRSLSIPAIGKHTSAINDPILSGAPQR* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1336 723 MobiDBLite consensus disorder prediction 535 576 - -
Apr3g1336 723 MobiDBLite consensus disorder prediction 552 566 - -
Apr3g1336 723 MobiDBLite consensus disorder prediction 245 283 - -
Apr3g1336 723 MobiDBLite consensus disorder prediction 262 281 - -
Apr3g1336 723 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 1 1 719 - -
Apr3g1336 723 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 2 1 719 - -
Apr3g1336 723 Gene3D - 164 419 IPR027417 -
Apr3g1336 723 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 418 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1336 Apr-Chr3 27815202 27819718 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1336 - - gmx:100807339 1125.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1336 3 27815202 27819718 Apr3g1336 3 27815202 27819718 ECH