Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1319 ATGGTTCAGCATAAGAGACCCCCAAATAGCAGGGGGTACTATGTTAAGATGAAGCTTCTGCACAAACATGGCAGGCCTCAACAAGAAAAGAGTTGCTTCTACAAATACTACAAATGGGTTCTCTGGCTCTCTCTCTCCCTCTATTTTTTCACTTCCTACCTCATCAGCAACAACCATCACCACCACACCACTCCAACATCTCACGACAAAACAACCCATGTCTCTAGAGCACTCTTCGAATCAAACAACGCCACAGCTCCACTACAAAACAACCTAGGTCTGAAGAACCTTAAGGTGTTTGTCTACGATCTTCCTCCGAAGTACAACACGGATTGGTTGGCGAATGAAAGATGCAGCAAACATTTGTTTGCGTCAGAGGTTGCCATTCACAGGGCTCTGTTGACCAGCGATGTGCGCACGTTTGACCCTTACGAAGCTGATTTTTTCTTTGTTCCAGTTTATGTCTCTTGCAACTTCAGCACCGTTAATGGGTTCCCAGCAATTGGTCACGCGCGTTCCCTCATCGCTTCCGCGGTCAAACTCATCTCTTCGGAGTACCCATTTTGGAACCGAAGCAGAGGTTCCGACCACGTCTTCGTGGCTTCTCACGATTTCGGTTCTTGTTTCCACACCCTGGAGGACGTGGCGATGGAAGATGGAGTGCCAGAAATCATGAAGAATTCGATCGTGTTGCAGACGTTTGGCGTCGTGTATGATCATCCGTGCCAGAAGGTTGAACATGTGGTGATTCCGCCGTACGTTTCACCGGAAAGCGTGCGCGACACGATGGAAAATTCTGCGGTGAATGGACGGCGAGATATTTGGGTTTTCTTCCGTGGAAAAATGGAGGTCCATCCCAAGAACGTTAGTGGAAGATTTTACAGCAAGAAAGTGCGGACGGTGATATGGCGGAAGTTCAACGGTGACCGGAGGTTTTACCTACGGAGGCATAGGTTTGCCGGTTACCAGTCAGAGATTGCTCGTTCGGTGTTCTGTTTGTGTCCTTTGGGGTGGGCCCCATGGAGTCCGAGACTGGTTGAATCGGTTGCGTTGGGATGCGTGCCGGTTGTTATAGCCGATGGTATACGGTTGCCGTTTGTTTCCGCCGTGAAGTGGGGTGAGATTTCGCTTACGGTGGCGGAGAGGGAGGTGGGGCGGCTGGCGGAGATTCTTGAACACGTGGCGGCGACCAACCTGAGCACCATCCAGAGGAACCTGTGGGACCCAGAGACGAGGAGGGCCCTACTTTTTAACAGCCAGGTCAAGGAAGGTGATGCCACGTGGCAGGTCTTAAGAGCTTTGAGTGAAAAGCTGGATAGGTCCTATAGGGGTTCGAGGGTTTCGCGCCAATTGGATGTTGACACGTAA 1368 0.5073 MVQHKRPPNSRGYYVKMKLLHKHGRPQQEKSCFYKYYKWVLWLSLSLYFFTSYLISNNHHHHTTPTSHDKTTHVSRALFESNNATAPLQNNLGLKNLKVFVYDLPPKYNTDWLANERCSKHLFASEVAIHRALLTSDVRTFDPYEADFFFVPVYVSCNFSTVNGFPAIGHARSLIASAVKLISSEYPFWNRSRGSDHVFVASHDFGSCFHTLEDVAMEDGVPEIMKNSIVLQTFGVVYDHPCQKVEHVVIPPYVSPESVRDTMENSAVNGRRDIWVFFRGKMEVHPKNVSGRFYSKKVRTVIWRKFNGDRRFYLRRHRFAGYQSEIARSVFCLCPLGWAPWSPRLVESVALGCVPVVIADGIRLPFVSAVKWGEISLTVAEREVGRLAEILEHVAATNLSTIQRNLWDPETRRALLFNSQVKEGDATWQVLRALSEKLDRSYRGSRVSRQLDVDT* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1319 455 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 26 443 IPR004263 GO:0006486|GO:0016757
Apr3g1319 455 PANTHER GLUCURONOSYLTRANSFERASE, PUTATIVE-RELATED 26 443 - -
Apr3g1319 455 Pfam Exostosin family 95 393 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1319 Apr-Chr3 27635591 27638670 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1319 K20889 - gmx:100818569 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1319 3 27635591 27638670 Apr3g1319 3 27635591 27638670 ECH
Apr2g2166 2 26785022 26786679 Apr3g1319 3 27635591 27638670 PCT