Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1298 ATGGAAAAGCTTTGTCATTTTGTATCTATTCTCCTTTTCATTGCTCTGCTATTTCATGGAGGAAAGGTGTCAGCTTTGAAGAGTGGAGATGGATCAGAGGAATGGGGATATGTAGAAGTTAGACCCAAAGCTCACATGTTTTGGTGGCTTTATAGAAGTCCTTATAAAGTGGAAGATCACAATAAGCCATGGCCAACTATTCTGTGGTTGCAGGGAGGACCTGGTGGTTCTGGAGTTGGGATTGGAAATTTTGAAGAGGTTGGGCCTTTGGACACAAGCTTGAAGCCAAGGAATTCAACATGGTTGAGAAAAGCGGATCTCTTGTTTGTGGACAATCCGGTTGGAACAGGGTACAGTTATGTTGAGGACAAAAATCTCCTAGTGAAAACAGATATAGAAGCAGCCACTGATTTGACTACACTGTTAATTGAGATATTCAACAGAGATGAAAAGCTGCAAAAGAGCCCGCTGTTCATTGTGGCAGAGTCTTATGGTGGCAAATTTGCTGTCACTCTTGGACTGTCTGCTCTGAAAGCTATTGAAGATGGAAAATTGAAGCTTAAACTTGGAGGTGTGGCATTAGGAGATAGTTGGATCTCCCCAGAAGATTTTGTGTTCTCATGGGGTCCTCTCCTTAAAGATCTCTCACGACTTGATGATAATGGATTGCAACTATCAAACAGTTTGGCTCAGAAGATCAAACAGCAAATAGCGGAGGGTAGATTTTTAGATGCAACCAACACATGGGGTGAACTTGAGTCCATGATTTCAAAAGGCAGCAACAATGTGGACTTCTACAATTTGTTGGAGGATTCAGGAAGTGGTGATATATCAGCAATGGAGCTGGGATTGTTCCCAAAAATATCAATTAAGAGATACTCTAAGTATCTTACTGCCATGAGGTCAAGGTCAACTCCTGGGGGTGGTGCTGACCTCGACGAGTTACTAAATGGTGTCATAAAGAAGAAGTTACAGATCATCCCTGAGAATGTGACATGGGGAGGGCAAGCTGATGATGTCTTCTCAAGTCTTGCAAGTGATTTTATGAGGCCAAGAATTGATGAGGTTGATGAGCTACTCGCTAAAGGGGTCAATGTGACTGTGTACAATGGACAAGTTGATCTGATTTGTGCAACCAAGGGGACTGAAGCTTGGATTAGTAAACTTAAATGGGAAGGGCTTAAAAATTTCTTGGGTGAAGACAGAACACCCCTTTACTGTGGAAGTGACACAACGAAGACCAAAGGCTTTTTTAGGTCATACAAAAACCTATACTTCTATTGGATCCTCAAAGCTGGCCATTTTGTACCCACTGATCAACCCTGCGTGGCACTAGACATGGTAGGAGCAATTACAGAGTCACCAGCTACTTGA 1374 0.4258 MEKLCHFVSILLFIALLFHGGKVSALKSGDGSEEWGYVEVRPKAHMFWWLYRSPYKVEDHNKPWPTILWLQGGPGGSGVGIGNFEEVGPLDTSLKPRNSTWLRKADLLFVDNPVGTGYSYVEDKNLLVKTDIEAATDLTTLLIEIFNRDEKLQKSPLFIVAESYGGKFAVTLGLSALKAIEDGKLKLKLGGVALGDSWISPEDFVFSWGPLLKDLSRLDDNGLQLSNSLAQKIKQQIAEGRFLDATNTWGELESMISKGSNNVDFYNLLEDSGSGDISAMELGLFPKISIKRYSKYLTAMRSRSTPGGGADLDELLNGVIKKKLQIIPENVTWGGQADDVFSSLASDFMRPRIDEVDELLAKGVNVTVYNGQVDLICATKGTEAWISKLKWEGLKNFLGEDRTPLYCGSDTTKTKGFFRSYKNLYFYWILKAGHFVPTDQPCVALDMVGAITESPAT* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1298 457 Pfam Serine carboxypeptidase 32 450 IPR001563 GO:0004185|GO:0006508
Apr3g1298 457 ProSitePatterns Serine carboxypeptidases, serine active site. 159 166 IPR018202 GO:0004185
Apr3g1298 457 PANTHER CARBOXYPEPTIDASE 7 454 - -
Apr3g1298 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 97 109 IPR001563 GO:0004185|GO:0006508
Apr3g1298 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 120 IPR001563 GO:0004185|GO:0006508
Apr3g1298 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 145 170 IPR001563 GO:0004185|GO:0006508
Apr3g1298 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 424 437 IPR001563 GO:0004185|GO:0006508
Apr3g1298 457 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 7 454 IPR001563 GO:0004185|GO:0006508
Apr3g1298 457 Gene3D alpha/beta hydrolase 22 456 IPR029058 -
Apr3g1298 457 SUPERFAMILY alpha/beta-Hydrolases 32 453 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1298 Apr-Chr3 27480708 27485680 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1298 K09646 - gmx:100808412 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1298 3 27480708 27485680 Apr3g1298 3 27480708 27485680 ECH