Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1297 ATGCAGCCGAATTTGTTCCCCTTTGGAAGCGTGCTGGGGAATCCGTTCATTTTCAATGGCGATTTGAGTGAGGGAGGGATCGAGAGCTCTAGGGTTTTCTACTTGCTCCCCTTCTTTTTGCTCTCCCAGGGAGGAGCAATGGATTTGTCTAAGGTCGGCGAAAAAATATTGAGCTCCGTTAGGTCCGCCAGATCTCTCGGATTGCTCCCTTCCGTTTCTGATCGTCCCGAGGTTCCAGCTCGAGCTGCTGCTGCTGCTGCTGTAGCTCGTGCTCTTGCAGGATTACCTCCTCACCAGAGGTATAGTCTTTCATCAAGTTCAGAAGAACTGAGTTCAATATATGGAAGCAGACCTCACAGCCAAGTAGTGGAGGAGCTGGAGGATGAATTCTATGAGGAGGACTTTGATCCTATTAGGCATGTTTTAGAGCATGTTCCTGCTGAAGAAAATGAACTAACATATTTTGAAAAACAGGCTGCCCTTAGATTGGTCCAACTGGATAGAGTAGCAGAGCGTTTATCTCGCCACGTTATGGAGCATCATGAAGTAATGGTGAAGGGGATGAATTTGGTCAGCGAATTGGAAAAAGACTTAAGAATCGCAAATGTCATCTGTATGAATGGAAGACGACACTTGACATCATCTATGAATGAGGTTTCAAGGGATCTGATTGTGAATTCTTATTCAAAAAAGAAACAAGCTCTGCTGGATATGCTTCCAACCTTGACTGAACTTCGACGTGCATCAGACATGCAATCAACACTTGAATCTCTTGCAGAGGAAGGGAATTACTGGAAGGCATTTCAAGTCCTATCTGAGTATTTGCAACTCTTAGATAGTTTGTCAGATCTTTCAGCAATACAAGAAATGAGTTGTGGTGTGGAGGTTTGGCTTGGAAGAACTTTACAGAAGTTGGATGCTCTTTTATTGGGAGTATGTCAAGAATTCAAGGAAGATGGCTATATAACAGTAATTGATGCGTATGCATTAATAGGGGATACTGCTGGTCTTGCTGAGAAGATACAGAGTTTCTTCATGCAAGAAGTGATCTCAGAAACGCACTCTGTGTTAAAGGCTATTGTGCATGAGGATAAGGAGGGACTTTCGCAAAATAGTAGTTCTCATTTCCATTCCAGGCTCACTTACAGCGATCTATGCCTTCAAATACCTGAATCTAAGTTCAGGCAGTGCTTATTAAGAACATTGGCTGTTCTATTTGACCTCATGTGTTCCTACCATGAAATTATGGATTTTCAATTAGAGGGAAAGGACTCAGCAACACAACCTTCTAATAAGTGCAGTGAAGACATTTCCTGTAGTCCAGGTGAGGCTCGGGAAGTTGATTCAGATGTAAGAGCCTGCAACAGTTCTATGTCCAGTTATGGAGATATAATACATGGCTCATCTTCTAGGGAGGAATCTGCAACAATCAGCTCACTAACTGAAACTACTGGTTCACCATACAGTGTTTCTCACGATCCAACAAAGGAGGCTAGTGAGGACAACGTGGCATCAAGCATTGAATCCCCATGGTACCATCTTCGCAAAGAAGCTATAACATTTGTTTCACAGACCCTTCAAAGAGGACGCAGAAATCTGTGGCATCTCACTGCAAGTCGTGTGTCAGTATTGCTTTCTTCTGCTGCATCATGTTCTGCCAGCATTCATCAATTCTTGAAAAACTATGAAGATCTCAGTGTCTTCATTTTGACTGGGGAAGCCTTTTGTGGAATTGAAGCAGTTGAATTTAGGCAGAAGTTAAAGGTTGTCTGTGAAAACTATTTCATAGCTTTTCATCGACAAAATGTGCATGCACTAAAAATGGTTTTGGAGAAAGAGACTTGGCTAAAATTACCTCCAGATTCAGTACAAATTATCAGTTTTGCTGGACTTATTGGTGATGGAGCACCATTGATTTCTTTATCCAGTGGTAAATCAACTAATGTTAGTGCAATCCATTCCGATAAATCAGTAAACATGGTGCACACCACTGCAAGGAAGAATGGGTTTTCTCATTGGATTAAAAGTGGAAACCCTTTTTTGCAAAAATTATCAACCCCCAGAGAAGGTCATGGATACTCCCAACCTAACGGATCAGTTTGTGGTGAATTTGATGGGAATTCAAACAATAATTTTCATGATGATAAAGTTTCACCTAGAAAGAATGATTCCAATCAAATCAATGGTGCCAATTCTGTTTCAGAAGATGAAAATGAGGATCTTCTTGCTGACTTTATTGATGAAGACAGTCAACTGCCTAGTCGAATTTATAAACCCAATCATTCAAGAAATCCCTCCTCACATGGTAATGATGAAGAGAATACAGCACAAACTGGATCTTCTTTATGTCTTTTAAAGTCTATGGATAAATATGCAAGGCTTATGCAGAAATTAGAAGTGGTTAATGTTGAGTTCTTTAAGGGAATATGCCAATTGTTTGAAGTTTTTTTCTATTTTATATATGAAACATTTGGTCAGCAAAACACTGGTTCAAGTGGAAAAAGCTCGACTAACTCTCTTAATTATCACTTGAGAACAGCTTTATCCAGAATAAACCAGGATTGTGAAGAGTGGATTAAGTTCCAATCATCTTCACCAACATCACTGAGTTCATCATTCATGCATACTGAATTGATACCGACAAATCCTCCCCATGCAAATTTTGGTCACTCCTCAGGGACTTCTTTAGGTCTCAAGGAAAGATGTGTGGCTGTTGACACTATATCTCTTGTTGCTCGAATACTGAATAGATCCAAAGCTCATCTCCAATCAATGCTCTTGCAAAGTAATTCAACTATACTTGAGGATTTCTATCTTCATCTGGTGGATGCTGTACCGGATCTCACAGAGCATGTTCATAGGACAACAGTGAGGCTACTGTTGCACATTAATGGGTATGTTGAACGTGTTGCCAATTGTAAATGGGAATTAAAAGAGCTTGGCATGGAGCATAATGGATACGTTGATTTGTTGCTGGGGGAGTTTAAGCACTATAAAACACGACTTGCTCATGGTGGAATTCGTAAAGAGGTTCAGGACCTATTATTGGATTATGGGCTTGAAATTGTGGCAGAAACTCTTGTTGAAGGACTTTCACGGGTGAAGAGATGTAGTGATGAAGGACGAGCTCTTATGTCATTGGATCTGCAGGTTTTGATCAATGGGCTACAGCATTTTGTGTCGCTGAATGTGAAGCCCAAACTACAAATGGTTGAAACTTTCATCAAGGCTTACTACCTTCCCGAGACAGAATATGTGCACTGGGCACGCGCACACCCGGAATACAGTAAAAGCCAGATTGTTGGACTGATCAACCTTGTTGCCTCTATGAAAGGTTGGAAGAGGAAAACTAGGTTGGAAATACTGGAAAAGATTGAATGA 3381 0.4093 MQPNLFPFGSVLGNPFIFNGDLSEGGIESSRVFYLLPFFLLSQGGAMDLSKVGEKILSSVRSARSLGLLPSVSDRPEVPARAAAAAAVARALAGLPPHQRYSLSSSSEELSSIYGSRPHSQVVEELEDEFYEEDFDPIRHVLEHVPAEENELTYFEKQAALRLVQLDRVAERLSRHVMEHHEVMVKGMNLVSELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVNSYSKKKQALLDMLPTLTELRRASDMQSTLESLAEEGNYWKAFQVLSEYLQLLDSLSDLSAIQEMSCGVEVWLGRTLQKLDALLLGVCQEFKEDGYITVIDAYALIGDTAGLAEKIQSFFMQEVISETHSVLKAIVHEDKEGLSQNSSSHFHSRLTYSDLCLQIPESKFRQCLLRTLAVLFDLMCSYHEIMDFQLEGKDSATQPSNKCSEDISCSPGEAREVDSDVRACNSSMSSYGDIIHGSSSREESATISSLTETTGSPYSVSHDPTKEASEDNVASSIESPWYHLRKEAITFVSQTLQRGRRNLWHLTASRVSVLLSSAASCSASIHQFLKNYEDLSVFILTGEAFCGIEAVEFRQKLKVVCENYFIAFHRQNVHALKMVLEKETWLKLPPDSVQIISFAGLIGDGAPLISLSSGKSTNVSAIHSDKSVNMVHTTARKNGFSHWIKSGNPFLQKLSTPREGHGYSQPNGSVCGEFDGNSNNNFHDDKVSPRKNDSNQINGANSVSEDENEDLLADFIDEDSQLPSRIYKPNHSRNPSSHGNDEENTAQTGSSLCLLKSMDKYARLMQKLEVVNVEFFKGICQLFEVFFYFIYETFGQQNTGSSGKSSTNSLNYHLRTALSRINQDCEEWIKFQSSSPTSLSSSFMHTELIPTNPPHANFGHSSGTSLGLKERCVAVDTISLVARILNRSKAHLQSMLLQSNSTILEDFYLHLVDAVPDLTEHVHRTTVRLLLHINGYVERVANCKWELKELGMEHNGYVDLLLGEFKHYKTRLAHGGIRKEVQDLLLDYGLEIVAETLVEGLSRVKRCSDEGRALMSLDLQVLINGLQHFVSLNVKPKLQMVETFIKAYYLPETEYVHWARAHPEYSKSQIVGLINLVASMKGWKRKTRLEILEKIE* 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1297 1126 MobiDBLite consensus disorder prediction 753 776 - -
Apr3g1297 1126 PANTHER UNCHARACTERIZED 5 1126 IPR040047 GO:0032456|GO:0042147|GO:1990745
Apr3g1297 1126 MobiDBLite consensus disorder prediction 684 734 - -
Apr3g1297 1126 MobiDBLite consensus disorder prediction 475 493 - -
Apr3g1297 1126 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN-RELATED 5 1126 - -
Apr3g1297 1126 MobiDBLite consensus disorder prediction 475 502 - -
Apr3g1297 1126 Pfam Protein of unknown function C-terminus (DUF2451) 896 1126 IPR019514 -
Apr3g1297 1126 MobiDBLite consensus disorder prediction 755 776 - -
Apr3g1297 1126 Pfam Vacuolar-sorting protein 54, of GARP complex 123 418 IPR019515 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1297 K23288 - gmx:100788476 1944.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1297 3 27456027 27471387 Apr3g1297 3 27456027 27471387 ECH