Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1283 ATGGGTACTCTGCTTCCAACCTTATCCAATGAAACATCAGAGAATCCAAATGCTTTGCAACATATTCCAAATCAAAAAGATGTTGACGCAGGTGCTCTGTTTGTCCTCAAATCAAAAGGTTCTTGGATGCATTGTGGTTACCACCTGACAACGTCAATAGTGGCACCACCACTGCTGAGTCTTCCTTATGCTTTCACCTTCCTTGGATGGACGGTTGGGATCTTCTGCTTAGTAATTGGAGCTCTTGTCACTTTCTATTCCTACAATTTAATATCTCGCGTTCTTGAACATCACGCTCAATTGGGTAATCGCCAGCTACGATTTAGGGACATGGCTCGCGATATTTTAGGTCCACGATGGGGTCGCTATTTTGTGGGGCCAATTCAATTCGCTGTCTGCTACGGAGCTGTAGTGGCTTGTACCCTTTTGGGAGGACAATGCATGAAGGCAATTTACCTGCTGTCAAACCCAAATGGGACCATGAAGCTTTACGAGTTTGTAATCATATTTGGATGCTTCATGCTGATTTTGGCTCAAACCCCATCTTTCCATTCATTGAGACACATTAATCTAGTGTCTTTGGTTCTGTCCTTAGCCTATAGTGCCTGTGCTACTGTTGGTTCCATATACATTGGAGACTCATCAAAAGGACCAGAAAAGGATTATTCGTTGAAAGGTAATTCAGTGAATCGCTTATTTGGAGTCTTCAATGCCGTTGCCATCATTGCCACCACTTATGGAAATGGAATAATACCAGAAATTCAGGCAACATTAGCACCACCCGTGAAAGGGAAAATGTTCAAGGGACTATGTGTTTGTTATGCTGTACTTATTTTAACTTTCTTTAGCGTATCTGTGTCTGGTTACTGGGCATTTGGCAACGAATCTGAAAGCCTCATCTTAAGCAACTTCGTGGATAATGGGAAGCCTCTAGTCCCCAGGTGGTTTATCTATATGACCAACATTTTCACTATAGCACAATTATCAGCAGTTGGTGTGGTTTATTTGCAACCTACAAATGAAGTGCTAGAGCAAACTTTTGGAGACCCAGAAAGCCCAGAATTTTCGAAGCGAAATATAATCCCGAGAGTGATTTCACGGTCATTAGCTATGACTGTTGCAACCATTGTAGCAGCCATGCTTCCATTTTTTGGAGACATAAACTCGCTTATGGGAGCGTTCGGTTTTATCCCACTTGACTTTATTCTGCCGGTGGTTTTCTACAATTTGACATTTAAGCCATCTAAGCGAAGCCTAATTTTCTGGTTGAATGTGACCATTGCTGTGGTTTTCTCCGCATTTGGAGCTATAGCATCCATTGCAGCAGTTAGACAGATAGTTCTTGATGCCAAAAATTACCGATTATTTGCAAATGTATGA 1380 0.4196 MGTLLPTLSNETSENPNALQHIPNQKDVDAGALFVLKSKGSWMHCGYHLTTSIVAPPLLSLPYAFTFLGWTVGIFCLVIGALVTFYSYNLISRVLEHHAQLGNRQLRFRDMARDILGPRWGRYFVGPIQFAVCYGAVVACTLLGGQCMKAIYLLSNPNGTMKLYEFVIIFGCFMLILAQTPSFHSLRHINLVSLVLSLAYSACATVGSIYIGDSSKGPEKDYSLKGNSVNRLFGVFNAVAIIATTYGNGIIPEIQATLAPPVKGKMFKGLCVCYAVLILTFFSVSVSGYWAFGNESESLILSNFVDNGKPLVPRWFIYMTNIFTIAQLSAVGVVYLQPTNEVLEQTFGDPESPEFSKRNIIPRVISRSLAMTVATIVAAMLPFFGDINSLMGAFGFIPLDFILPVVFYNLTFKPSKRSLIFWLNVTIAVVFSAFGAIASIAAVRQIVLDAKNYRLFANV* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1283 459 Pfam Transmembrane amino acid transporter protein 39 443 IPR013057 -
Apr3g1283 459 PANTHER OS05G0424000 PROTEIN-RELATED 28 455 - -
Apr3g1283 459 PANTHER GABA TRANSPORTER 1 28 455 - -
Apr3g1283 459 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1283 Apr-Chr3 27305495 27309513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1283 24 458 Organic Solute Cotransporters AT5G41800 49.541 1.30e-155 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1283 - - gmx:100791114 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1283 3 27305495 27309513 Apr3g1283 3 27305495 27309513 ECH