Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1276 ATGTCCAATTCCAATCCCAACAACCGCCAGCCTCCGTCGCTGCCTTCTTCGTGGGCCAAGAAAACGGGCTTTAAGCCCAAGTTCTCCGGCGAGACTAATGCCACCAATTCGGGCCAAATAACCACCCCGCCGCCCAAGCCCAGAGTACCCGAGCCCAACCTGGATCTCGAAGCCGCTCGAGCTCCAACTCCCGCAACTGCCAATGGCGTTGCAGTGGGTGACAACGTTCCCGTTCCGCCTCCGCCGCCGTCTGCGATGGCGAAGAAGCGGAGAGACTCCGACGGCGTTCCGAAGAGTTCCGTTCCAAGTTCCAATGACCAGGCGCTGCCGCGAAGAAATGCGAGGCACGATGAAGTGGTGGACGACGACCGGTTTGTGTCTCGGCACTCGCATATTAAATATGAACTGAGAGATTCACCTGGTTTAGTTCCGATTGGCGTGTATGGTATTCAGCACTACGTTTCGGTAATAGGTTCATTGGTTCTCGTTCCACTTGTCATTGTTCCTGCCATGGGAGGGACTCATGAGGAAACTTCTATGGTGGTATCGACAGTGCTGTTCGTTTCGGGGTTGACTACACTCTTGCATATTGCTTTTGGGTCCAGGCTGCCCTTGATTCAGGGCCCTTCCTTTGTCTATCTGGCGCCAGCTCTCGCGATAATCAACTCCCCGGAGTTTCAAGGAGTAAATGGAAATAAATTCAAGCATATAATGAAGGAGCTCCAGGGGGCTACAATCATTGGATCAGCTTTTCAAGCTTTAGTTGGATATACTGGACTTATGTCGTTGTTAGTAAGGTTGATCAATCCTGTGGTTGTTTCCCCAACTATTGCTGCAGTTGGGCTTTCATTCTTCAGTTATGGTTTCCCATTAGTTGGTACATGTATTGAGATTGGTGCAGTACAAATATTAGTGGTTATTCTTTTTTCTCTTTATCTTCGTAAGATATCTGTTCTTGGACATCGAATATTTCTAATATACACAGTTCCTTTGGGTCTGGCAATTACATGGGCATTCGCTTTCTTGCTGACTGAAGTAGGAGTTTACAACTACAAAGGGTGTGATATAAATATACCTGCCTCAAATATGGTTTCAGAGCACTGCAGAAAACATTTTTCTAGAATGAGGCATTGTCGTGTTGATACTTCTCAAGCATTGAAATCGTCTTCATGGTTTAGATTTCCTTACCCACTACAATGGGGTACTCCTGTCTTCCATTGGAAAACGGCTATAATCATGTGTGTGGTTTCCTTAATCTCATCTGTGGATTCGGTTGGCTCATATCATGCATCTTCATTATTGGTAGCATCTAGACCACCAACTCCTGGAGTTCTTAGTCGAGGAATTGGTTTGGAAGGTCTTTCTAGTGTCTTGGCTGGTCTCTGGGGAACCGGAACTGGATCTTCAACTCTAACTGAAAATGTTCATACAATTGCTGTAACTAAAATGGGAAGCCGCAGGGCAGTTCAACTGGGTGCCTGCTTTCTGATAGTGTTGTCTCTTGTGGGTAAGGTTGGAGGATTCGTTGCTTCAATTCCTGAAGTCATCGTTGCTGGTCTCCTCTGCTTTATGTGGGCAATGCTCACAGCATTGGGTTTGTCGAATCTACGCTATAGCGAGGCAGGAAGTTCTCGCAATATCATCATTGTTGGGTTATCCTTGTTTTTCTCTCTTTCCATACCCGCATACTTTCAACAATATGGCATCTCTCCAAAGTCTAACTTGTCTGTACCAAGTTATTTTCAGCCCTATGTTGTGGCTTCTCACGGGCCTTTCCACAGCAAATATGGAGGGGTATGGGTTTGTGTCATGCTTTTTTACTATTATGAATCTTTTGGAATGTCTGGTATTTCTATTGGAGCAATTGTTAATCTGTTCCTTTTGCAGTTGAACTATGTCTTGAACACGCTTTTTTCACTGCACATGGTGATCGCGTTTCTTGTCGCGGTTATCCTGGATAATACTGTACCCGGCAGTAAGCAGGAACGCGGGGTATATGTTTGGTCTGAGCCTGAGGTTGCTCGAAGGGAGCCTGCTATTACCAATGACTATGAGTTGCCCTTGAGAGTTGGTCGGATTTTCAGATGGGTGAAGTGGGTTGGCCTGTGA 2109 0.4633 MSNSNPNNRQPPSLPSSWAKKTGFKPKFSGETNATNSGQITTPPPKPRVPEPNLDLEAARAPTPATANGVAVGDNVPVPPPPPSAMAKKRRDSDGVPKSSVPSSNDQALPRRNARHDEVVDDDRFVSRHSHIKYELRDSPGLVPIGVYGIQHYVSVIGSLVLVPLVIVPAMGGTHEETSMVVSTVLFVSGLTTLLHIAFGSRLPLIQGPSFVYLAPALAIINSPEFQGVNGNKFKHIMKELQGATIIGSAFQALVGYTGLMSLLVRLINPVVVSPTIAAVGLSFFSYGFPLVGTCIEIGAVQILVVILFSLYLRKISVLGHRIFLIYTVPLGLAITWAFAFLLTEVGVYNYKGCDINIPASNMVSEHCRKHFSRMRHCRVDTSQALKSSSWFRFPYPLQWGTPVFHWKTAIIMCVVSLISSVDSVGSYHASSLLVASRPPTPGVLSRGIGLEGLSSVLAGLWGTGTGSSTLTENVHTIAVTKMGSRRAVQLGACFLIVLSLVGKVGGFVASIPEVIVAGLLCFMWAMLTALGLSNLRYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPKSNLSVPSYFQPYVVASHGPFHSKYGGVWVCVMLFYYYESFGMSGISIGAIVNLFLLQLNYVLNTLFSLHMVIAFLVAVILDNTVPGSKQERGVYVWSEPEVARREPAITNDYELPLRVGRIFRWVKWVGL* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1276 702 MobiDBLite consensus disorder prediction 1 17 - -
Apr3g1276 702 MobiDBLite consensus disorder prediction 28 42 - -
Apr3g1276 702 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 19 600 - -
Apr3g1276 702 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 629 702 - -
Apr3g1276 702 MobiDBLite consensus disorder prediction 1 119 - -
Apr3g1276 702 Pfam Permease family 147 564 IPR006043 GO:0016020|GO:0022857|GO:0055085
Apr3g1276 702 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 19 600 - -
Apr3g1276 702 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 629 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1276 Apr-Chr3 27216019 27223814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1276 15 702 Organic Solute Cotransporters AT2G27810 68.889 0.0 928
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1276 - - gmx:100799537 1126.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1276 3 27216019 27223814 Apr3g1276 3 27216019 27223814 ECH
Apr2g2125 2 26434628 26443376 Apr3g1276 3 27216019 27223814 PCT