Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1273 ATGAGAGACATAGTTTCTTGTTTCAGCGAGAACTCAGTGAACGTGTCTCACTATTACTCATGTTCTAGCTACTCAAACAACACTTGCATCTCTCCCACCGCTGCACCTTCAACACAAAACTCAATCTCAAGTGTCTACAAAATACTTCTCTCCACGCTGAAGCACTTTCTCATCACCGTCACTTGGTGTAAGAGCCACTCCAACCAAGGACTCAGCATAAGCTTCGGAGATGAAGACCCTTCACCCTTCAGACTCAACACCAATTCACGCTTTTTCAGGAAGAAAAAGGGTAGCAAATTGATAGAGTCTTCTCATGAGTTAAAGATTGAAGTCATGTGGGATCTTTCAAATGCCAAGTATGATGCTGGACCAGAACCTGTTGAAGGGTTTTATGTTGTGATTCTTGTTGATTCAGAAATAGGTTTGGTGCTTGGTGACATGGCTGAAGAAGCTGTGGCCAAGAGGTTCAAAACTAGCACTCCTATGGCTAAGGTTTCACTTGTATCAAGAAGGGAACATTGTTCAGGTAACACCCTTTATAACACTAAGGCTCAGTTCTGTGACACTGGCACGTGGCATGATGTTATGATCAGATGCAGTGTGGAAAATGAAGGGCTCAAGTATCCTGTTCTTTCTGTGTGCATTGATAAGAAGACAGTGATTCGTGTGAAGAGGTTGCAGTGGAATTTTAGGGGTAATCAAACAATTTTTGTTGATGGGTTGTTGGTGGATTTGCTTTGGGATGTTCATGATTGGTTCTTCAACCCTGCTTCTGGATATGCAGTGTTCATGTTCAGGACCAGGAGTGGAATGGATAGCAGGTTGTGGTTAGAGGAGAAGATTGCACAGAAAGATAAAGACACAGTTGAATTCTCCTTGTTGATCTATGCCTGTAAGAGCTCATAA 906 0.426 MRDIVSCFSENSVNVSHYYSCSSYSNNTCISPTAAPSTQNSISSVYKILLSTLKHFLITVTWCKSHSNQGLSISFGDEDPSPFRLNTNSRFFRKKKGSKLIESSHELKIEVMWDLSNAKYDAGPEPVEGFYVVILVDSEIGLVLGDMAEEAVAKRFKTSTPMAKVSLVSRREHCSGNTLYNTKAQFCDTGTWHDVMIRCSVENEGLKYPVLSVCIDKKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHDWFFNPASGYAVFMFRTRSGMDSRLWLEEKIAQKDKDTVEFSLLIYACKSS* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1273 301 Pfam Plant protein of unknown function (DUF868) 37 299 IPR008586 -
Apr3g1273 301 PANTHER DUF868 FAMILY PROTEIN 1 300 - -
Apr3g1273 301 PANTHER EXPRESSED PROTEIN 1 300 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1273 Apr-Chr3 27186858 27189310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1273 1 300 EF-hand Containing Proteins AT5G28150 37.500 2.10e-61 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1273 - - gmx:100794621 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1273 3 27186858 27189310 Apr3g1273 3 27186858 27189310 ECH
Apr2g2122 2 26407813 26408751 Apr3g1273 3 27186858 27189310 PCT