Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1271 ATGGGGACTTTCAATCACTGTGTGATTATTAAGTTCAAGGATGGTGTGGTAGTAGAAGAACTCATCCAAGGGTTGGAGAAGATGGTCTCTGGGATTGAGCATGTCAAGTCCTTTGAATGGGGAAAGGACATTGAAAGCCAAGATATGCTAAGGCAAGGTTTCACTCATGCTTTCTTGATGACATTCAATGGGAAAGAGGAGTTCAGTGCATTTCAGACTCACCCAAAACATGTTGAATTCTCGGGAATATTTTCACCTGCTATTGAGAAGATTGTGGTGCTGGATTTCCCATCTAACATTGTCAAAGCACCGGCATGA 318 0.4245 MGTFNHCVIIKFKDGVVVEELIQGLEKMVSGIEHVKSFEWGKDIESQDMLRQGFTHAFLMTFNGKEEFSAFQTHPKHVEFSGIFSPAIEKIVVLDFPSNIVKAPA* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1271 105 PANTHER EXPRESSED PROTEIN 1 104 - -
Apr3g1271 105 PANTHER - 1 104 IPR044662 -
Apr3g1271 105 SUPERFAMILY Dimeric alpha+beta barrel 2 98 IPR011008 -
Apr3g1271 105 Gene3D - 2 105 - -
Apr3g1271 105 SMART Dabb_2 4 98 IPR013097 -
Apr3g1271 105 Pfam Stress responsive A/B Barrel Domain 5 97 IPR013097 -
Apr3g1271 105 ProSiteProfiles Stress-response A/B barrel domain profile. 4 96 IPR013097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1271 Apr-Chr3 27177545 27178393 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1271 - - gmx:100306003 196.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1271 3 27177545 27178393 Apr3g1271 3 27177545 27178393 ECH
Apr2g2120 2 26385982 26386927 Apr3g1271 3 27177545 27178393 PCT