Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1259 ATGGACACAAGAAGGGTACAACATTTTCTTAAGGGAAAGACTATTTTAGTCACAGGAACAACGGGTTACTTAGCAAAGGTTTTATTGGAAAAGATACTGAGGATCCAACCTGAGATTAAAAAACTGTATCTTCTTGTAAGAGCTCTAAACACTGAGTTGGCCACACGTCGTTTGCAAAATGAGGTCATTCAAAAAGATTTGTTTAAAGTGCTACGAGATAAGTGGGGTGAAGATTTTGACTCTCTCATATCGGAGAAGCTAGTGGCCATTGCAGGAGATGTGTCTCTTGAGAATTTGGGGCTGAAAGATGAAAATCTGAACAATGAGATGTTGGACGAGATAGACATCATTGTGAATTCTGCAGCATCTACCAAATTTGATGAAAGATTTGACATTTCAATGGGTGTAAATACAATGGGAGCATTACATGTCTTAAATTTTGCAAAAAAATGTCATAGAATGGAGATTCTTGTCCACATATCAACTGCTTATGTATACGGAGAGGCTAAGGATGGAGAAGCAATTCTACTGGAGAAACCATTTCAAATGGGTCGAAGCCTAAAAGGGGCATTAAAATTAGACATACATGCAGAAATGAATTTGATGGAGAAAAAAATGGATGAACTCCGAGCAAAAAATGCTAGTGAAAGCACATTCAAATTTGCAATGAAAGATTATGGAATTGAAAGAGCAAAATTGTATGGTTGGCCAAACACATACGTATTCACAAAAGCAATGGGGGAAATGCTTGTTATGCACCATAAAGATGATGTGCCATTAACAATTATACGACCCACCATGGTAACCAGTACATACAAGGATCCCTTTCCTGGTTGGATGGAAGGTTTAAGAACACTTGACAGCATAATTGTTGGCTATGGTCAAGGGAAAATAACTTGCTTTCCTGGTCATCCTAAGACAATTGTAGATACGATACCTGCAGACTTGGTGATCAATTGTGTGATCACAGCCATTGTCGCTCATTCAAATAAAGCTCCCAGAAATTTCATCTACCACATTGGTTCTTCGTTAAGAAATCCTCTCAAATTTTCAGATGTTCATAATATTTCCTATCACACTTTCTTGAAAACTCCGTGCAAAAATGAAAATGGAAAACCAATAGTCATTTCCAAAGGAACTTTGTTGACAAATATTGCTGCATTCAACAGTTATATGAAAATCCGATATGTCTTGCCACTACAGGTCTTAAATTTGGTGAACAAAGTGTCGTGCCAATTATTCAAAGATGTTTATGACGTCAACAACAGAAAAATCAAAATGGTGATGCGTCTAGCAGAACTATACAAACCATATATTTTTTCTAAAGTCGTCTTTGACGACACAAACACAGAAAATTTACGAAAGGTAACAAAGGATCATCTTCCCGTGGAGGATGTTGGGTTAGACTTTGACCCCAAAAGCATTGATTGGACTGAATATATGATGAACGCACACATTCCTGGCCTCCTCAAGTATGCGATCAAATGA 1488 0.3743 MDTRRVQHFLKGKTILVTGTTGYLAKVLLEKILRIQPEIKKLYLLVRALNTELATRRLQNEVIQKDLFKVLRDKWGEDFDSLISEKLVAIAGDVSLENLGLKDENLNNEMLDEIDIIVNSAASTKFDERFDISMGVNTMGALHVLNFAKKCHRMEILVHISTAYVYGEAKDGEAILLEKPFQMGRSLKGALKLDIHAEMNLMEKKMDELRAKNASESTFKFAMKDYGIERAKLYGWPNTYVFTKAMGEMLVMHHKDDVPLTIIRPTMVTSTYKDPFPGWMEGLRTLDSIIVGYGQGKITCFPGHPKTIVDTIPADLVINCVITAIVAHSNKAPRNFIYHIGSSLRNPLKFSDVHNISYHTFLKTPCKNENGKPIVISKGTLLTNIAAFNSYMKIRYVLPLQVLNLVNKVSCQLFKDVYDVNNRKIKMVMRLAELYKPYIFSKVVFDDTNTENLRKVTKDHLPVEDVGLDFDPKSIDWTEYMMNAHIPGLLKYAIK* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1259 495 Coils Coil 192 212 - -
Apr3g1259 495 Gene3D - 2 380 - -
Apr3g1259 495 PANTHER MALE STERILITY PROTEIN 2-RELATED 5 492 IPR026055 GO:0080019
Apr3g1259 495 CDD FAR-N_SDR_e 13 365 - -
Apr3g1259 495 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 341 IPR036291 -
Apr3g1259 495 CDD FAR_C 394 492 IPR033640 -
Apr3g1259 495 PANTHER FATTY ACYL-COA REDUCTASE 5 492 - -
Apr3g1259 495 Pfam Male sterility protein 396 495 IPR033640 -
Apr3g1259 495 Pfam Male sterility protein 17 320 IPR013120 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1259 Apr-Chr3 27060078 27062766 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1259 1 402 Acyl Lipid Metabolism Gene Families AT5G22500 53.350 9.49e-158 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1259 K13356 - tcc:18590350 557.755