Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1256 ATGGAATTGGGAAGCATAATCCACTTCCTTCAGGACAAGAATATTTTGGTCATTGGTGCCACTGGCTTCATAGCCAAAATTTTTGTGGAGAAGGTGCTTAGAGTTCAGCCAAATGTGAAGAAACTTTATCTTCTTTTGAGAGCCAGAGATGCCGAATCTGCCTCAGGACGACTGCAAAATGAGATTATAAAGAAGGAGTTGTTTAGATTGTTGAAGGAAAATCTGGGTGCAAAGTTCGATACCTTTGTTTCAGAAAAGTTAACCGTGGTGCCTGCAGACATTTCTCAGGAGGACTTGAATTTGAAGGACTCCTTTCTACGGGAAGAAATCTGCAATCAAACAGATGTTATAGTTAATTTAGCTGCTACAACTAATTTTGATGAAAGATACGACGTGGCATTGGGTATAAATACATTAGGAGTTAAGCATGTCTTAAGCTTCGCCAAAAGTTGTATTAAACTGAAGGTACTTCTGCACGTATCAACAGCATATGTATGTGGGGAGAGAGGAGGACTTATACTAGAGGACCCATACCAGTTAGGTGTGTCGCTAAATGGAGTACCCGGACTTGACATTGATGTGGAAAAGAAAATTGTAGAGGAGAAGTTAAATCAGCTTCGAGAAGAGGGAGCCACAGAAGATGATATTAAGATGGCCATGAAGGACTTGGGCATGAAAAGAGCAACTATGCATGGATGGCCAAACACATATGTCTTTACAAAGGCAATGGGAGAAATGCTTGTAGGAACTTTGAAGGAAAACATGTCCATTGTTATTGTACGTCCTACAATTGTTACTAGCACTTATAAAGAACCTTTCCCTGGTTGGGTTGAAGGAGTAAGAACCATAGACAGTTTGATTGTTGCTTATGGCAAAGGAAAATTAACATGCTTCATTGCAGATATTAAGGCAATTTTCGACGTGATACCAGCTGACATGGTCGTGAATACAATTCTAGCAGCCATGGTGGCTCATGCAAATCAGCCTGATGATATCATATATCACGTGGGTTCCTCTGTTGCAAATCCAGTCAAATACCAGAGTCTCCAAGACTATTCCTTTAGATATTTCACTGCAAAACCTTGTGTAGACAAGGAAGGAAAGATCATCAAGGTTGGCAAAGTTACAATATTGGACAACATGGCTAGCTTTGAGAGATATATGTTCATCCGTTACTTGCTTCCATTAAAGGGAATAGAGCTAGCCAATGCAGCTTTATGCCAATATTTCCAAGGAATGTATCTTGATATGAGCAGGAAAATCTATATTGTGATGCGATTGGTACACCTATACAAGCCCTACGTGTTCTTCAATGGCGTATTTGATAATATGAATACAGAAAGGTTGCAAATAGCAGCAAAACGAGGTGGGGTAGAGATGGATTTGTTTTACTTTGACCCTAAAATGATTGATTGGGAGGACTATTTCATGAATATTCATATTCCTGGGGTTGTCAAGTATGTCGTCAAGTGA 1473 0.3971 MELGSIIHFLQDKNILVIGATGFIAKIFVEKVLRVQPNVKKLYLLLRARDAESASGRLQNEIIKKELFRLLKENLGAKFDTFVSEKLTVVPADISQEDLNLKDSFLREEICNQTDVIVNLAATTNFDERYDVALGINTLGVKHVLSFAKSCIKLKVLLHVSTAYVCGERGGLILEDPYQLGVSLNGVPGLDIDVEKKIVEEKLNQLREEGATEDDIKMAMKDLGMKRATMHGWPNTYVFTKAMGEMLVGTLKENMSIVIVRPTIVTSTYKEPFPGWVEGVRTIDSLIVAYGKGKLTCFIADIKAIFDVIPADMVVNTILAAMVAHANQPDDIIYHVGSSVANPVKYQSLQDYSFRYFTAKPCVDKEGKIIKVGKVTILDNMASFERYMFIRYLLPLKGIELANAALCQYFQGMYLDMSRKIYIVMRLVHLYKPYVFFNGVFDNMNTERLQIAAKRGGVEMDLFYFDPKMIDWEDYFMNIHIPGVVKYVVK* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1256 490 CDD FAR-N_SDR_e 13 361 - -
Apr3g1256 490 Pfam Male sterility protein 19 318 IPR013120 -
Apr3g1256 490 Pfam Male sterility protein 392 490 IPR033640 -
Apr3g1256 490 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 337 IPR036291 -
Apr3g1256 490 Gene3D - 8 375 - -
Apr3g1256 490 CDD FAR_C 390 488 IPR033640 -
Apr3g1256 490 PANTHER FATTY ACYL-COA REDUCTASE 2 489 - -
Apr3g1256 490 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 489 IPR026055 GO:0080019
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1256 Apr-Chr3 27029485 27034915 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1256 112 488 Acyl Lipid Metabolism Gene Families AT4G33790 61.008 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1256 K13356 - gmx:100788994 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1256 3 27029485 27034915 Apr3g1256 3 27029485 27034915 ECH
Apr2g2109 2 26300454 26306141 Apr3g1256 3 27029485 27034915 PCT