LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr3g1243	ATGTTGAGTTCTGGGAATAACATAAACAGCAGCAACAGCAGTGGGACAACTTCTTCGGATATGCCACCTTTGCCCCAGTGTTTGCCACTAGATTCGATTACAGTAGGCAATCAAAAGTATACAGGAGAGCTAAGGAGGGTTCTAGGTGTTTCTGCAGGAAACACATCTGAAGATCATTCTTTTGGAGTTCCACATCCTAAACCCATGGCTCCAGGAGCCTCCGGGGAACTAAAGCACATTAAAGAAAGTGTACAAGATGGCTCCAGAAAGGCAAGGGATAGATCAAAAATGTTTCGGGAATCTATATCTAAATTGGATAGGTTCAGGGAGGTATTGAACACAAAGAAGCGACAAAGGAATGATTTATCAGGTGAGAGGGGAGGTGGAGTAAACCTAACAAAGATGGGTAGCCAGATGCACAAAACCCCTAATGATAATCTATCTCAGAGATCAGAAGCCAAGGCCTCAAATTCAATGCTGAACAAGCGAATTCGCACATCAGTGGCAGATGGGCGGGAGGAAAGTAGGTCTGCTGCTATCGGTAGGCCACAGATGGTCACTGAGAAGGATGGAAATTTGATTCAGACACTTGGTGGAACCTCTGTTCGAAATGAAGAGAAAACTCGCAGATTACTTGCTGGAGGTGAAGGGTTAGATCAAAAAATAAAGAAGAAGAGGTCTGTTGGAACTGTAGGAAACAGAGTTATAACTGGTGAAAGGGATGTAAAACGAGCTACTCTTCCAAAGGCAAATGCTGATTTGAAGATGCGATTTTATGATTCTCAGGGTTTCAGATTGAAGTCACTTCCTGGATCTAGTGGAATCAACAAGTCTGAGGGTTCTTCAGAGCCTGCTAATACAGGTGTGCGTACCATGCTTGCAAGTGAGCAAGGGGTTTCACTTCACCGGGACCACATAGCTGAGCAGCGAGTTGTAGTGAAAGGAAACAATAGGGCAAACATTCAAGAGGACCCAGCAAGTAGCCCTAGCACTCTAATAAAAAACAAGGTATCTCGGGCACCAAGAACGGGTTCCGTTAGTGCACTAGAATCATCTAACGTTCAACCTTCGTGTGGAACTTTTTCAGGTTCTTCTATACATCCAATGACCCAATGGGTTGGTCAGCGGCCACCTAAAAATTCACGCTCACGAAGAGTGAAAGTAGTTTCTCCAGCCGCACGCAATCTTGAAGTTCAGGTCTCATCTGAAGGCTGTCTAACTTCTGATTTCAGTGTTAAAGCTTCTTCTGCTGGCAACAATGGATTTCAACTGGCAAGCAGTGTAGACAATGGTACTCCAAAGTATAAAAGACCTCCTGATGATGTTTCATCTCCCTTTGGATTATCTGAAAGTGAAGAATCTGGAGCTGGGGAAAACAAAATAAAAGAGAAAGGAGTGAATGGCAGTGACTTTGCTTTGACTGCAGATAAGGCTGGAGCTTCTATAATGAGGAAGAATAAACTATCAACTGATGAATCTGGAGAGTATGTGCAGAGACAAGGAAGAACTGGAAGGAATTTATCCTTAATGAGGTCAGGCCTTCCTTCAGGGAGGGATAAGTCAGAGAATCTACCAATGATGAAGCCAGTACAGGAGATGAGGCCTAATGACAAGAGTAAAGCCAAATATGGGCGCCCTCCTTCAAAAAAGCAGAAAGAGCGCAAAGTTTTGACTCGCGTAGGGAAGCAACTGAACATTGGTTCTTCTGATTTTGGAGGTGAATCTGATGATGATCGTGAAGAGTTATATAAAGCTGCAAATGCTGCTCGTAATGCCAGCAAAATTGCTTGTTCGGGTTCATTCTGGAATAAAATGGAGCCTATTTTTGCTTCTATTAGCTTGGAAGATGCATCTTACTTGAAGCAACAGCTCAATATTGCTGAGGAATTTGATAAAAGTTTATCTCATATGTTTGGCATTGATCGTGATATGTTGGGTGTTGTTATAAATAACAAAACCACTCAAAGCTCAGATGAAAGAAAGAGAAGTCACTGTGATGAAGAATCTAATAAGATTGATGCTTTAGGTGGAAAGAATGACATGGAAAGACTGGACAAGGTTACTCCACTATTCCAAAGACTTCTTTGTGCTCTAATAGAAGAAGATGAAGGTGAAGAATCATATCACCTGAGTGAAGCAAAGAATATATCTCGACAATGCACTAGTGATGATTCTCATTGCGGTTCATGTAATCAAATCGATTTTGAACCCAAAGATCGGGATAGAATGGATTCTGAAGTTGAATCTAAGGTGGATCTTCAAATTCAGAAGAATTGCACATTGGACAGACTATCTTGTGATAAGAGTACTACATCCAACACATTTAGGTACCCAAACACATCCAGTTCTTTGCAAAGCACTGGAGTTTGGCAGGGAGATGAAGAATTTTGTCTTTCAGATATCACACACACTAGTGAAATATGTTCAAATGATCTTGATCAACTGCAGCATACTGAATTAAGCGTTCCTAGCTTTCCTTCTCCTGATGGCCAGTATCAGCTAATGTCCCTGGATGACAGGCTGCTGCTTGAGTTGCAAAGCATTGGCTTATATCCTGAAATATTGCCCGATTTAGCTGAGGAAGATGAAGCTATAAATCAAGACATTGAGAAACTTGAGAAAGCACTGTGTGAACAGAATGGGATGAAGAAGAAGAACTTGGACAAGATTGATGGAGCTATTCAAGAAGGGAGGGATGTGGAAAGGCGGAAGATTGAGCAAGCTGCATTTGACCAACTTATTGAAATGGCTTACAGAAAGAGATTGGCATGCCGTGGAAGCAAAAATTCAAAAGGTGCAGTTCACAAGGTGTCTAAACAAGTTGCTCTTGCCTTTGTCAAACGTACTCTTGGAAGATGTAAAAGATATGAAGAAGCTGGCATTAGCTGCTTTAGTGAACCTACCCTACAAAACATCTTGTTTGCCTCCCCTTCGTGTGAGAATGATGCACAACCTGCAGATTGCATGGTCTCTGGGACAGCCAGTAATACATGTAACAAAGCTTCCCATCAAATTGAAGCCAGAAAATCAGGTACAGTTTCTAGTGCTTCTGAAAAATATGATTGCCACAGAGACTATGCAGACAGGGGACTGGTTGATTCTTTTCAAGGTTCAATTCAGTCATCAGAACAAGCATCATCCAAGAATGGGTCTGTGTTTATCAAGGAGAAGAAGAGGGAAATGCTGGTCAATGGTGGTATTGGTGGTTCTTCCTCAAGAGCATCAAACCTTGATGGTTCTGTTCATGGTGGAGTGAAAGGAAAGAGAAGTGAGAGAGATAGGAATCAGAGTCGCGATCAGACCAGACAAAATCCTATTTCCAGAGCTGGACGCCTGTCTTTGGACAGTAGTCAAAATGAGAACAAACCAAAATCTAAGCCCAAGCAAAAGATTACTGCTAGTGGTCATGATAGGTTTATGGATGCAAAGGAATCTGCGTGTTTACCAAATCATGGTTCTAGTCTATCTGTAGTTGATGCAACCAATAGCGGTAGCAAAGATGGAGCTACATTATCTGGTAACCAGGACACTTCTCAAGTAAAGGAATCTACTGACTTTGGCAATTTGCAGTTACATGATTTAAGTTCAATAGAAGAATTTGGTGTATCTGGTGAACTTGGTGGGGCACATGATCTTAGTTCTTGGTTGAACTTTGATGAAGATGGTTTGCAAGACCATGATTCTATTGGCCTTGAAATACCGATGGATGACCTATCAGAGTTAAATATGCTTATGTGA	3738	0.4184	MLSSGNNINSSNSSGTTSSDMPPLPQCLPLDSITVGNQKYTGELRRVLGVSAGNTSEDHSFGVPHPKPMAPGASGELKHIKESVQDGSRKARDRSKMFRESISKLDRFREVLNTKKRQRNDLSGERGGGVNLTKMGSQMHKTPNDNLSQRSEAKASNSMLNKRIRTSVADGREESRSAAIGRPQMVTEKDGNLIQTLGGTSVRNEEKTRRLLAGGEGLDQKIKKKRSVGTVGNRVITGERDVKRATLPKANADLKMRFYDSQGFRLKSLPGSSGINKSEGSSEPANTGVRTMLASEQGVSLHRDHIAEQRVVVKGNNRANIQEDPASSPSTLIKNKVSRAPRTGSVSALESSNVQPSCGTFSGSSIHPMTQWVGQRPPKNSRSRRVKVVSPAARNLEVQVSSEGCLTSDFSVKASSAGNNGFQLASSVDNGTPKYKRPPDDVSSPFGLSESEESGAGENKIKEKGVNGSDFALTADKAGASIMRKNKLSTDESGEYVQRQGRTGRNLSLMRSGLPSGRDKSENLPMMKPVQEMRPNDKSKAKYGRPPSKKQKERKVLTRVGKQLNIGSSDFGGESDDDREELYKAANAARNASKIACSGSFWNKMEPIFASISLEDASYLKQQLNIAEEFDKSLSHMFGIDRDMLGVVINNKTTQSSDERKRSHCDEESNKIDALGGKNDMERLDKVTPLFQRLLCALIEEDEGEESYHLSEAKNISRQCTSDDSHCGSCNQIDFEPKDRDRMDSEVESKVDLQIQKNCTLDRLSCDKSTTSNTFRYPNTSSSLQSTGVWQGDEEFCLSDITHTSEICSNDLDQLQHTELSVPSFPSPDGQYQLMSLDDRLLLELQSIGLYPEILPDLAEEDEAINQDIEKLEKALCEQNGMKKKNLDKIDGAIQEGRDVERRKIEQAAFDQLIEMAYRKRLACRGSKNSKGAVHKVSKQVALAFVKRTLGRCKRYEEAGISCFSEPTLQNILFASPSCENDAQPADCMVSGTASNTCNKASHQIEARKSGTVSSASEKYDCHRDYADRGLVDSFQGSIQSSEQASSKNGSVFIKEKKREMLVNGGIGGSSSRASNLDGSVHGGVKGKRSERDRNQSRDQTRQNPISRAGRLSLDSSQNENKPKSKPKQKITASGHDRFMDAKESACLPNHGSSLSVVDATNSGSKDGATLSGNQDTSQVKESTDFGNLQLHDLSSIEEFGVSGELGGAHDLSSWLNFDEDGLQDHDSIGLEIPMDDLSELNMLM*	1246

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr3g1243	1245	MobiDBLite	consensus disorder prediction	1	30	-	-
	Apr3g1243	1245	MobiDBLite	consensus disorder prediction	533	556	-	-
	Apr3g1243	1245	MobiDBLite	consensus disorder prediction	314	384	-	-
	Apr3g1243	1245	MobiDBLite	consensus disorder prediction	490	556	-	-
	Apr3g1243	1245	MobiDBLite	consensus disorder prediction	1	23	-	-
	Apr3g1243	1245	Coils	Coil	855	875	-	-
	Apr3g1243	1245	MobiDBLite	consensus disorder prediction	1084	1099	-	-
	Apr3g1243	1245	MobiDBLite	consensus disorder prediction	1100	1120	-	-
	Apr3g1243	1245	PANTHER	OS05G0107300 PROTEIN	1	1245	-	-
	Apr3g1243	1245	PANTHER	SPECTRIN BETA CHAIN, BRAIN	1	1245	-	-
	Apr3g1243	1245	MobiDBLite	consensus disorder prediction	135	164	-	-
	Apr3g1243	1245	MobiDBLite	consensus disorder prediction	1121	1135	-	-
	Apr3g1243	1245	MobiDBLite	consensus disorder prediction	1064	1135	-	-
	Apr3g1243	1245	MobiDBLite	consensus disorder prediction	53	74	-	-
	Apr3g1243	1245	MobiDBLite	consensus disorder prediction	424	463	-	-
	Apr3g1243	1245	MobiDBLite	consensus disorder prediction	117	177	-	-
	Apr3g1243	1245	MobiDBLite	consensus disorder prediction	493	510	-	-
	Apr3g1243	1245	Coils	Coil	105	125	-	-
	Apr3g1243	1245	MobiDBLite	consensus disorder prediction	320	378	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr3g1243	Apr-Chr3	26903070	26912625	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr3g1243	-		-	gmx:100817881	2053.48

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr3g1243	3	26903070	26912625	Apr3g1243	3	26903070	26912625	ECH